| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1487 |
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| Symbol | |
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| ID | 8367924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1766410 |
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| End bp | 1769286 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644983920 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003141594 |
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| Protein GI | 256820315 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT GGTTTTTAAA TGTAGCCGTA CTTTTTCTCA CATCAATGCT TTACTCTCAG
CAAGGAGTTA TTACAGGTGA AGTAATTGAT GGTGATTACA ACGCTCCGTT AATGGGAGCA
AATGTTTTGG TTAAAGGGAC TACCAAAGGG GCTTCTACTG ATATGGACGG TAAGTATTCC
TTGAATGTAG ACTCACCTAC TGGAACCTTA GAGTTCTCTT ATCTTGGATA TGTTACCAAG
ACAGTTTCGT ATAAACTTGT GAATGGTAAA GCGCACGTGC GAATTACCCT TACAAGCGAC
CAACAAACCC TAGGAGAGGT AATTGTAACA GGTAAAAGCA CCTTGTTAGA CATTGCACAA
GAGCGTAAAA CACCTGTGGC GGTATCTACT ATTCAAGCTA CCGAAATTAT AGAAAAATTA
GGCACACGTG AACTTCCTGA AGTGCTCAAT AGAACTCCTT CTGTTTATGC TACAAAAGGG
GGAGGAGGCT TTGGTGATTC TAAAATCAAT ATTCGAGGCT TTGACAGTAG GAATGTGGCT
GTAATGGTTA ATGGTATGCC TGTAAACGAT ATGGAAGGTG GTACCGTATA CTTCAGTAAC
TGGACAGGGC TTTCAGATGT AACTTCCGCA ATGCAGGTAC AACGTGGGCT CGGTGCATCT
AAGTTGGCGA TTGCATCGGT AGGTGGTACT ATGAATTTCA TTTTGCGTGC TTCGGATATG
CAAGAAGGAG GGAATATATC TTTCAACTAT GGTACTAATC AAGAATATAA AGGTACGGTT
TCTTACAATA CAGGAAAGAG TCTTACTGGT TGGTCGGCTT CTGTGTTGTT CAGCAAAAAT
GCAGGACGGA AATATGTAGA TGGTACTCAG TTTGATGGCT ATAGCTACTA TTTTGCGTTA
GGTTATGAAC CTTCTAAAAA ACATAGTTTC CAATTTACCT TCACAGGGGC TCCACAATGG
CATAACCAAC GTAATATAAG TCCGCTAATT TCTGATTATC AGAAATATGG TTCAGAAGAC
AAACCCAACC GTCGCTATAA TTCAGATTGG GGATACTTAA ATGGTGAAGA ACACACCATT
AAGAAAAATG TTTATCACAA ACCAGTAGCA ATGCTCAATT GGGATTGGAA TATCAATGAA
AGTACTTCCC TTAGTACTGT AGTATATGCA TCATTAGGAC GTGGTATGGG AACAAGTTCA
TCGGGGGTGG CACATTCAAT CTCTTCGAAA ACTACTGCTA GTGGTACAAC CACCTATTCT
CTTCAGAAAA ACTATTTAAA TTCTTTCCGT AGAGATGATG GACAGATAGA TTTCGATAAA
GTGGTGCGTT ATAACAACGG AGAGACAGTA GATGATTTAC TCCCTATGCA ACACCCAAGA
GAAGCAGGAA AGAACGTAAC AATTGCTAAT CCAGGTGGAG GTCGAGCTTT TACAGGTTAT
GGTGAAGGTT TTACCTTAAA TGGCTCAGTA AACTCACACG ACTGGTATGG TATCCTTACC
AACCTGCAAC ACCAGATTAA TGATCACTTC ACTATTAATA TGGGGCTTGA TGGTCGTTAT
TACTATGGTT ATCACTACCA AGTAGTAACT GATTTGTTGG GTAACGATAG TTATACTGAT
AATACACGAA ATAACAACAA GAATTTGGCA ACCCCTACCG TAATTCGTTC TGCGGTATCT
ACTAAGCCCT CTTGGAATCC TTTCCAGAAA GTAGAACCTC TTGAAAATCG TATAGGTTAT
AGTAGTGAAG GGGAAGTGAA ATGGATGGGA CTTTTTTCAC AGTTAGAATA CTCTGACGAT
CATTTTTCAG CTTTCTTACA AGGTTCTACC TCTATGCAGT CATACCAACG TATTGATAAC
TTTTTGAAAG ATGGAGTTTC ACGCGCTATA AGTACAAATC CTAATTCGGT AATGTATACT
AAAACAGGTT TTAAAAACTT GATAGGTTAT AATATCAAAG GAGGAGTGAA TTATAATATC
AACGAACAGC ATAATGTGTA TGCTAACATA GGATATTATT CTAAGCAACC TTTCTTCAAC
GCTGTATATC CTAACAATCT AAACTATTTA AATCCTTCGC TTACCAATGA AAAGATATTT
GGAGTAGAAG CTGGATATGG TTTTAAATCT AAATTCTTCA GTGGTAATTT AAACCTTTAT
CACACTACTT GGAAAGATAG ATTCCTTCGT CAAACTTACA CTTTCGGAAG TTCTTCAGGA
GGACGTGGCA GTAATACAGG CTATGCAAAT ATTTTGGGTG TTCAAGAAAT ACACAATGGG
GTGGAAGTAG ATTTCAAAGC TACTATTACT GATTACTTAA AACTAAATGG TATGTTCTCA
TTTGGTGACT GGTATTACAA AGGCGATGCC TCAGGAACTC TTTTGAATGA GAATGGTAAT
GCTATAGACT TACAAGGAAA TGAGGTGCCT GTTGGTAGGG CTGCAGAGCT TAAACTATAC
TTAGATAAAG CAAAAGTAGG ACAAACAGCT CAAACAACAG CTTCTTTGGG ATTAACTGCA
CTGCCCGTTA AGAATTTGAA TTTTGATATC GATTGGCGCT ATATAGATAA TTTATATGCT
AATTTGAATA TTGGTACTTT TTCTGAAAAA ACAGTAGCTG AAAAAGGAGC TATAAAATTA
CCTGCTTATC ATTTGTTTGA CCTTTCTGCT TTTTATAGAT GGCAACTTAC TGATAAGCAA
CGTCTCACTT TCTCAGCTCA CGCCTATAAC CTATTAGATA CTTATTACAT CGCTGAATCA
TATACAAGTA TTCACACCAC TGATAGTAGT AAAACTTACC AAGGTATCGA TGTGAGAAAC
CAAGTGTACT TTGGCGAAGG TCGTACCTTT AGCTTCGGAG TACGCTACAA CTTCTAA
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| Protein sequence | MKSWFLNVAV LFLTSMLYSQ QGVITGEVID GDYNAPLMGA NVLVKGTTKG ASTDMDGKYS
LNVDSPTGTL EFSYLGYVTK TVSYKLVNGK AHVRITLTSD QQTLGEVIVT GKSTLLDIAQ
ERKTPVAVST IQATEIIEKL GTRELPEVLN RTPSVYATKG GGGFGDSKIN IRGFDSRNVA
VMVNGMPVND MEGGTVYFSN WTGLSDVTSA MQVQRGLGAS KLAIASVGGT MNFILRASDM
QEGGNISFNY GTNQEYKGTV SYNTGKSLTG WSASVLFSKN AGRKYVDGTQ FDGYSYYFAL
GYEPSKKHSF QFTFTGAPQW HNQRNISPLI SDYQKYGSED KPNRRYNSDW GYLNGEEHTI
KKNVYHKPVA MLNWDWNINE STSLSTVVYA SLGRGMGTSS SGVAHSISSK TTASGTTTYS
LQKNYLNSFR RDDGQIDFDK VVRYNNGETV DDLLPMQHPR EAGKNVTIAN PGGGRAFTGY
GEGFTLNGSV NSHDWYGILT NLQHQINDHF TINMGLDGRY YYGYHYQVVT DLLGNDSYTD
NTRNNNKNLA TPTVIRSAVS TKPSWNPFQK VEPLENRIGY SSEGEVKWMG LFSQLEYSDD
HFSAFLQGST SMQSYQRIDN FLKDGVSRAI STNPNSVMYT KTGFKNLIGY NIKGGVNYNI
NEQHNVYANI GYYSKQPFFN AVYPNNLNYL NPSLTNEKIF GVEAGYGFKS KFFSGNLNLY
HTTWKDRFLR QTYTFGSSSG GRGSNTGYAN ILGVQEIHNG VEVDFKATIT DYLKLNGMFS
FGDWYYKGDA SGTLLNENGN AIDLQGNEVP VGRAAELKLY LDKAKVGQTA QTTASLGLTA
LPVKNLNFDI DWRYIDNLYA NLNIGTFSEK TVAEKGAIKL PAYHLFDLSA FYRWQLTDKQ
RLTFSAHAYN LLDTYYIAES YTSIHTTDSS KTYQGIDVRN QVYFGEGRTF SFGVRYNF
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