| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1482 |
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| Symbol | |
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| ID | 8367919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1756848 |
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| End bp | 1758224 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983915 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003141589 |
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| Protein GI | 256820310 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.712271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATC CAATTCTTTT AGTAGAAGAT GATGTAGTTT TCTCCAAAAT GTTAGGTAAA
TTTTTGGAGC GCAATGGATA TGAAGTAGTA AGATGTTATA ATTTAGAAGA AGCGGAGAAA
AGCCTAAATG CATCGCTAAG TTTAGTATTC ACTGATTTAC GTCTGCCCGA TGGTGACGGT
ATCAATTTCT TGAAAAAGGT GAAAGAAGTA TATCCAGATT TGCCTGTAGT GGTAATGACC
AGCTATGCGG AAGTATCGAC TGCGGTAGAG GCAATGAAAT TGGGTGCTTT TGATTATATA
TCGAAACCGT TCCAACAAGA GGACGTACTG AATGTTATTA AGAATGCGCA AAGCAGTACG
CGTACGGCTT CGTTACCTAA GAAGGAAAAT GTGAAGGCGT ACAACAGCCC TGGCAAAGCT
GCTCAGCCTG TTGTTACTAA CGAAAATTCA TATATAGAAG GTGTAAGTGC CGCTTCTAAA
AAGCTGAATA AGTTTATCAG TTTGGTAGCC CCTACGGATA TGTCGGTACT CATTACCGGT
GAAAGTGGTA CGGGTAAAGA GGTGATAGCC AAATCTATTC ACTTGAAAAG TGAGCGTCGT
AACAAGCCTT TTATTGCGGT GGACTGCGGT GCCATTCCTA AAGAAATTGC ATCGAGTGAG
TTCTTCGGTC ACGTAAAGGG TTCGTTTACG GGAGCAATTA CCGATAAAAA AGGACACTTT
GAAGAAGCAA ATGGTGGTAC TATTTTCCTT GATGAGGTAG GAAACCTAAG CTATGACAAC
CAAATACAGT TGCTACGTGC CCTACAAGAG CGCCGTATTA AACCTATTGG TAGTTCTAAG
GAAATAGAAG TTGATATTCG TGTATTGGCA GCTACCAACG AAGATTTATT GGCAGCAGTA
GGAAAAGGAG AGTTTCGCGA AGACCTTTAT CACCGATTGA ACGAGTTTTC GATAAAAGTA
CCTTCGCTAA GTGAGCGCAA AGACGACTTG ATGATATTTG CTTCATACTT CTTGGAAAAA
GCAAATGAAA AGCTACATAA GAACGTACAA GGGTTTACTG AAAAAGCGGT ACAAAAGATG
CTTTTATACA CTTGGGGAGG TAACTTGCGC GAACTATCGA ACACGGTGAA ACGCGCTGCC
CTACTCACAC AAGGTGATTA TATTACCGAA AATGAGTTGC CAGAGCCTGT AATTACTGAA
ACACGCCATT TCCCTACAGA GCGTTTTTCT TTTTCAACCA AAGAAAACGA GCGTGAACTC
ATTATTAGTG CGCTACACGA GACCCATAAT AATAAAACAG AAGCAGCTAA GCTGTTAGGC
TTTACACGTA AAACACTTTA CAACAAACTT AAAGCCTATA ACATAGACGA ATTTTAA
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| Protein sequence | MKNPILLVED DVVFSKMLGK FLERNGYEVV RCYNLEEAEK SLNASLSLVF TDLRLPDGDG
INFLKKVKEV YPDLPVVVMT SYAEVSTAVE AMKLGAFDYI SKPFQQEDVL NVIKNAQSST
RTASLPKKEN VKAYNSPGKA AQPVVTNENS YIEGVSAASK KLNKFISLVA PTDMSVLITG
ESGTGKEVIA KSIHLKSERR NKPFIAVDCG AIPKEIASSE FFGHVKGSFT GAITDKKGHF
EEANGGTIFL DEVGNLSYDN QIQLLRALQE RRIKPIGSSK EIEVDIRVLA ATNEDLLAAV
GKGEFREDLY HRLNEFSIKV PSLSERKDDL MIFASYFLEK ANEKLHKNVQ GFTEKAVQKM
LLYTWGGNLR ELSNTVKRAA LLTQGDYITE NELPEPVITE TRHFPTERFS FSTKENEREL
IISALHETHN NKTEAAKLLG FTRKTLYNKL KAYNIDEF
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