| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1473 |
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| Symbol | |
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| ID | 8367910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1742221 |
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| End bp | 1745286 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983906 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141580 |
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| Protein GI | 256820301 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0507296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA TCATTAGCAT TTGTATTTTG CTGTTCAGTA TCCCAATGCT GGCGCAAAAA
GTAACTATTA CGGGGGTAGT TACCGATGAA AACAAACAAC CCCTCCCTGG TGCAAGCGTT
GCTATAGAGC ACGCGCATTC AGGTACGGCT ACTGATTTTG AAGGGCACTT CTCCCTAAGT
GTAGCTCCTA CCGATAAAAT AGTAGTGAGC TTTATGGGCT ATCGCTCCAA AACCATAGCC
GTAGGTAAAA CACGTACTTT CAATGTATCT CTCGAACCTG AGGTCACTCA GATTGATGAG
GTAGTGCTTG TAGGGTACGG TACACAGCGC AAAAGCGATA TCTCTACGGC AGTAGCTTCG
GTGAAGATGG CAGATATTGC CCAAAGCAGT CCGTCGCAGG TATTGCAAGC GTTGCAAGGT
AAAGTGAGTG GGGTGCAAAT CATCTCTTCC GATGGTTCTG CTTCCAGCGG ACTCACATTT
AGAATTCGCG GGGTGAACTC CATCACAGGA GGTACGCAAC CGCTCTTTGT TATTGATGGG
GTGCCAATGC CTACTCAAAG GGTAACCAAC ACCAATGAAG ATGTGGCTAC CAATCCGCTA
CTCAGCTTAA ACCCTAACGA TATCGAGTCA ATGGAAATCC TCAAAGATGC CGCCGCAGCA
GCTATCTACG GGTCTAACGG TTCTAATGGG GTAGTGCTTA TCACCACCAA AAAAGGAAAA
GAGCTCGCCA AACCAAAATT CAATTTCAGT TATGCAAGTT CTATTGATAT GATGCCTAAT
ATCCCTTTGA AGGTGCTCAG CGCTGAAGAT TACGCTCACA AAATGCTTGA TTATGGCACT
TGGGGCAATC AACCTCAAAT AGACTTTTGG CAACGAATGA TTGCCGAAAA AGGCTGGAAT
CACCCTGCCG TAAAAGATTG GCTGAAAGAA GTTACCCAAA CAGGTACCAA AAACGAAGCT
AACGGTAGTA TCACGGGTGG TACCGACCAA ACCCGCTATA TGCTTTCAGT GGGTTATCTG
AACCAAGAAG GACTTATCAA GCGTTCTGCT TTCAACCGCT TCACTTCTCG TCTCAACCTC
TCTCAGAAGA TTAACGATAA GATGAATGCA GGTATCAACC TCTCTTATGC CGTTTCTAAG
GATAAAAATC CCGTAAGCGA TTGGTCTCAA AATGGAGTGG TTCTCAAAGC TTTGCAAACT
TCTCCTTTCT TAGACTACCC TGGTTTTGGT ACCCTGATGA GCTATCCTAA CATTCGTACG
ATGAGCCCTA AGGTAGCGGT AGACCAAGTG GATATCAACA CCAAATACAA CGAGCTCAAC
GCCAATGTAT ACCTCAGCTA TCAACTGCTT AAAGATTTGA CTTTTAACAC CAGTGCTTCT
TACCGTTTAC ACACTATTGG TCAAGACCGT TTTTGGGGAC CTGACACTTG GTTCGGACAG
TCAGAACGCG GACGTATGGA ACTCTCTCAT CGCAATGAGA ACAGCTGGGT ATATGAAGCC
CGTTTGCAAT ACTCTAAGAG CATCAATAAA CACTATTTTT CTATAATGGG CGCTTTTGAA
GCCAATAAGT ATTGGACAGA TTATACTTAC AATAAGTCTA CTAACTTCGA GGATACCAAA
CAAGGTATTT GGGGTATCAA CCAAGGGTTA GTAACCTACG CACCTTTGTA CACTTATGAT
GGCAACCAAT TGGTATCGTA CATCAGTAGG GCTACTTATA GTTATAACAA CAAGTATGTG
CTCAACGCTT CTTTGCGTGC TGATGGTTCT TCTAAATTTG GTAAGAATAA CAAATACGGT
TACTTCCCTG CCGTTTCTTT GGCTTGGAAT GCTCACGAAG AAGACTTTAT CAAGAAAATA
GAAGCTATTT CCAACTTGCG TTTGCGCGGT AGTTTCGGTA TGACAGGTAA CAACCAAATC
CCATCTTACC AATCTTTAGC ACAACTCGCT AAAAACAAAG TAGTATTGGA CGGTAACAAA
GTGGAAATCG GTCGTTATAC CAGCAATATT GCTAACGACA ACCTTAAATG GGAAAGCCAA
AAGCAATACA ATATCGGTTT AGATTTGTCC TTCCTCAAAA ACCGTTACAC CCTTTCTACT
GAATTGTATT ACAAACGCAT AGACGATATG CTTTTGGAAG TGAATATCCC TTCTACTTCG
GGATTCCAAA AAGCGTGGAA GAATGCAGGT TCAATGGAAA ACAAAGGTCT CGAAGTGAGC
TTCAATGCAC AATGGTTGCG TGAAGGCGAT TTCAAATGGA CAACTGATTT CAATATTTCT
TTCTACCGAA ACAAAATCCT TTCATTAGAC GAAGGTCAGT ATCAACAGTT TTACGACCGT
GGCATCAACT CCAAAATCAA AAGTGATGTG CTCTTGCGTG TAGGTATGCC GGTAGGTATC
TATTATGGTT ATGTAGCCGA TGGTGTATTC CACAACCAAA ACGAAGTGGA TAATGCACAA
CCAGGGCCTA ACGTCGCTTT AGGCGGTTTG CGTGTGAAAG ACATCAACCA CGATGGTGTA
ATCGATACTA ACGACCGTGT GCCCGTAGCC GATGTAAACC CGTTGCACAC GGGTGGTATA
GGTAACACTT TCTCCTATAA AGGTTGGGAA TTGTACGCTT TCTTGCGTTG GTCGTATGGC
AATGATGTAG TAAACGGTAA TGCTTACTAC CTCACAGGCA CTAAGAATAT CGACAATATC
ACACAAAGCG TTTATAACAA CGTGTGGTCA GAAGCACACC CCGACCGTAA CTTCCCGCTC
TTTGGAGGTG GTTTCTGGGC TGAAAACGCT TTCCGTAGCG ACTTGGTAGA AGACGGTTCT
TTCTTGCGTT TGCAAACTGT TACTCTTAGT TACAACTTGC CTAAAGAAGT GTTAGAGCCT
TACAAACTTA ACAAATTGCG TGTAGGCGTT ACCGGTACCA ATCTTGCACT CTGGACGCGT
TATTCAGGGT TTGACCCCGA AGCCAATACG GGCTATGGAA CTATTGCTCG CTTAGCCCCA
GGTCTCGATA TGAGTCCGTA CCCACGACCT ACATCGGTTT TATTCTCAGT AGAAGTTGGT
TTTTAA
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| Protein sequence | MKSIISICIL LFSIPMLAQK VTITGVVTDE NKQPLPGASV AIEHAHSGTA TDFEGHFSLS
VAPTDKIVVS FMGYRSKTIA VGKTRTFNVS LEPEVTQIDE VVLVGYGTQR KSDISTAVAS
VKMADIAQSS PSQVLQALQG KVSGVQIISS DGSASSGLTF RIRGVNSITG GTQPLFVIDG
VPMPTQRVTN TNEDVATNPL LSLNPNDIES MEILKDAAAA AIYGSNGSNG VVLITTKKGK
ELAKPKFNFS YASSIDMMPN IPLKVLSAED YAHKMLDYGT WGNQPQIDFW QRMIAEKGWN
HPAVKDWLKE VTQTGTKNEA NGSITGGTDQ TRYMLSVGYL NQEGLIKRSA FNRFTSRLNL
SQKINDKMNA GINLSYAVSK DKNPVSDWSQ NGVVLKALQT SPFLDYPGFG TLMSYPNIRT
MSPKVAVDQV DINTKYNELN ANVYLSYQLL KDLTFNTSAS YRLHTIGQDR FWGPDTWFGQ
SERGRMELSH RNENSWVYEA RLQYSKSINK HYFSIMGAFE ANKYWTDYTY NKSTNFEDTK
QGIWGINQGL VTYAPLYTYD GNQLVSYISR ATYSYNNKYV LNASLRADGS SKFGKNNKYG
YFPAVSLAWN AHEEDFIKKI EAISNLRLRG SFGMTGNNQI PSYQSLAQLA KNKVVLDGNK
VEIGRYTSNI ANDNLKWESQ KQYNIGLDLS FLKNRYTLST ELYYKRIDDM LLEVNIPSTS
GFQKAWKNAG SMENKGLEVS FNAQWLREGD FKWTTDFNIS FYRNKILSLD EGQYQQFYDR
GINSKIKSDV LLRVGMPVGI YYGYVADGVF HNQNEVDNAQ PGPNVALGGL RVKDINHDGV
IDTNDRVPVA DVNPLHTGGI GNTFSYKGWE LYAFLRWSYG NDVVNGNAYY LTGTKNIDNI
TQSVYNNVWS EAHPDRNFPL FGGGFWAENA FRSDLVEDGS FLRLQTVTLS YNLPKEVLEP
YKLNKLRVGV TGTNLALWTR YSGFDPEANT GYGTIARLAP GLDMSPYPRP TSVLFSVEVG
F
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