| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1472 |
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| Symbol | |
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| ID | 8367909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1740403 |
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| End bp | 1742208 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644983905 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003141579 |
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| Protein GI | 256820300 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.105312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC ATATTACCAC CATTATAGTA ATAGGGGCGA GCCTCGGATT GAGCAGTTGT
GGCAAGTTCT TGGAAGAAAC CCCCAAGAGC ACCCCTACAT CTCAATTTTT CTATGAAAAT
GAATTGGATG CTCGCCAAGC GATGAACGGG ACTTACCGTT ACCTCACTGA TGTGTATGTT
ACAGGACACG GCACCAAACA AATCAGTACC GACCTTGCCA AACGTGCCGA TTGGGACGAA
GGGGGAGGCT TGCGTAACTA CAAGTTTGGG TCAGACAACG ATTATATTAC CCAAATGTGG
CAACAACATT ATGTAGCTAT TAAGAACTGC AACTCGGTAA TCGATAATGT AACCGAACAC
CAAGGTCGCA TCAATAACTG GGAACGCTAT GTAGCCGAAG CTCGTGGTGT GCGCGCTTAC
TTGTACTTCG ATTTGGTGCG TTGGTTTGGC GATGTGCCTT TGGTTGTGAA AGAAACCAAA
TCACTCAACG ACCTCAAAGT GCCTCGTACC CCACAAAAGC AAGTGTTTGA GCAAATCATT
GCCGACTTTA CTTACTCGAT GGCTCACGTA GCCGAAAAAG GCGATACAGG CAATGGTTAC
CAATACGGAC GTATTACCAA AGATGCTTGT CGCGGTTTCT TGGCTAAAGT ACACTTATGG
CTCGCTTCAG TAGCGCAACG CGACGGACGT GAAGTGCTTG GTTCGGCTAC TGAAAACTAC
ACCAAAGCAA TGAACTATGC CAAAGAGGTC ATACAAGGCG GTCGCTACCA ATTAGTAGAA
TACTATCCTG ATGTATTCAA CGCTAAAACC AAAATAAGCG AAGCTCCAAA AGAAGTTATT
TGGTGCGTAC AAGGTCTTAC AGGCGACGAT ACCGGTACCC TCACAGGAAT GCTTTACGGA
ATGAGAGGTA ATGAAAACTT AGGAGGTTCG TGGGATAACA TCTCCAGTTC CGATTACCAC
CGTATGATTT ATGAACCCTC CGACTCTATT CGCCGGTTGT GGAACTGCCC ACGTGTGCAA
GTGCTCGACA ATGGTAAGTT ATGGGGTTGG GACTACAATA TTTACAAAGA TACCCGTGTA
GACCAACCTC TTAGTAAGGC TACCGAAAAC AACAACTGGG TAATGTGGAG TATCGGTAAG
TTCCGCCGTT TCCCATTAGC TGATACCTCT TCGTATAACT ACAAAAACTT TGGTATGGAT
GAACCGTTAC TTCGCTTTGC TGATGTACTC CTCATCTATG CAGAGGCTTA TAACGAGGTA
AACCATTCAC CTGGGGCTTA CACACCCTCG TCTTCTTTAA CAATGAATGG CACCAACGTA
CAAAGTGCTT ACGATGCGGT GAATTTAGTG CGCAAACGCG CTCGTATCTC TAACAAAGCA
GGCGGACGCA TCGTACACCG CGATGTATTG CCTCGTGATT TGGATAAAAC CCATATCAAC
GATGTAAACA CCGTAGTACC CGATTGGAAA ACCTCCTCTT ATGGTTATGA CTATGCAGGT
ACTGCTATGT GGACAGCTAA ACATTACAGC GATGATTATA CCGCTTTCCG CACTGAAATC
TTAAATGAAC GGGCTCGCGA GCTTGTAGGA GAAACCACCG ACCGCTGGTG TGACCTCGTA
CGCCGTGGCA TTCTGGTACA AGCTTTCCAA AACTGGCGTA TCAACAATCC CTTTATCAGT
GGGGAGGAAC GCCGTATTCC AGCACCTGCT GCGCCTGAGA ATGTTCGCCC TTATCACCAA
TTGTTACCTA TTCCGCTTAG CGAATTGGAC GCAAATAAGA ATTTAACTCA AAATCCTGGA
TACTAA
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| Protein sequence | MKLHITTIIV IGASLGLSSC GKFLEETPKS TPTSQFFYEN ELDARQAMNG TYRYLTDVYV
TGHGTKQIST DLAKRADWDE GGGLRNYKFG SDNDYITQMW QQHYVAIKNC NSVIDNVTEH
QGRINNWERY VAEARGVRAY LYFDLVRWFG DVPLVVKETK SLNDLKVPRT PQKQVFEQII
ADFTYSMAHV AEKGDTGNGY QYGRITKDAC RGFLAKVHLW LASVAQRDGR EVLGSATENY
TKAMNYAKEV IQGGRYQLVE YYPDVFNAKT KISEAPKEVI WCVQGLTGDD TGTLTGMLYG
MRGNENLGGS WDNISSSDYH RMIYEPSDSI RRLWNCPRVQ VLDNGKLWGW DYNIYKDTRV
DQPLSKATEN NNWVMWSIGK FRRFPLADTS SYNYKNFGMD EPLLRFADVL LIYAEAYNEV
NHSPGAYTPS SSLTMNGTNV QSAYDAVNLV RKRARISNKA GGRIVHRDVL PRDLDKTHIN
DVNTVVPDWK TSSYGYDYAG TAMWTAKHYS DDYTAFRTEI LNERARELVG ETTDRWCDLV
RRGILVQAFQ NWRINNPFIS GEERRIPAPA APENVRPYHQ LLPIPLSELD ANKNLTQNPG
Y
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