Gene Coch_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1464 
Symbol 
ID8367901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1728872 
End bp1729906 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content42% 
IMG OID644983897 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_003141571 
Protein GI256820292 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB)
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAT TTTTAGGAAT CGACTACCCT ACGTGGTGGT TCATCATTAT AGGATTTTTG 
ATTACAGGCT ATGCTATTTT AGACGGCTTT GACTTCGGCG CTGGAGCGTG GCATTTGTTC 
TTCGATAAGA AAAAAGAACG CCGTGTAGCT CTAAACGCTA TCGGACCAGT ATGGGACGGT 
AATGAAGCGT GGTTAGTAAT TGGGGGAGCA GGTATTTTCG CTGGTTTCCC ACTAATGTAT 
GCCGAATTGT TTTCGGCTAT GAACACGCCT TTTATGCTTT TCCTCACCTT TATTATTTTT 
AGAGCGGTAG CTATTGAGGT ACGCGGCAAA GAGGACAGCG ACCGTTGGCG CAACACTTGG 
GATACCGTAT ATAGCGTGTG TAGCATCGTA TTGCCTGTGC TCTTAGGCGT GGTAATAGCC 
AATGTACTAC AAGGGCTTCC GTTAGACGAG AACTTTCAGT ACACCGGAGG AGCGCTTTTT 
ACTTTCCTTA CCCCTTATGC ATTACTTGTA GGTGTAATGA CACTCTTGCT CTTTATGGTA 
CACGGAGGTT TGTATTTGCT TCTCAAAACT CACGGAGATA TGCACCACCG CATCGAGAAA 
CGCATTAACT ATGCATACCT CGGCTTTTTG GTAGTGTTTA CAGCAGTAGC GATTTACAGT 
ATGCTCACTC CTCATTTAGC TGAAAATATT GCTAATAACA CTGCACTGAA AGTATTCCCT 
GCGTTATTGC TCCTCAGCAT CTTAAGCGTA GCTTTCTTTA TGAAGAAAAA AGACTATAAA 
AAGGCTTTTG TGGGTACTAT TCTCACCATC GTTTTCTTTA TGGTGGTAGC AGCACTGAAT 
TTGCACCCTA CTTTCTTGAG AACTACTTTA GAAACAGGCA ATAGCATTAC CGTATACAAC 
GCAGCAGCTT CTCAAAAATC ATTAAAGATT ATGCTCACTA TTACTGCGAT AGGGGCGCCG 
TTATTGCTTC TCTACACTTA TTTCGCCTAC AAAGTATTCT GGGGCAAAGT AGAGATTGAT 
GAAAACAGTT ATTAA
 
Protein sequence
METFLGIDYP TWWFIIIGFL ITGYAILDGF DFGAGAWHLF FDKKKERRVA LNAIGPVWDG 
NEAWLVIGGA GIFAGFPLMY AELFSAMNTP FMLFLTFIIF RAVAIEVRGK EDSDRWRNTW 
DTVYSVCSIV LPVLLGVVIA NVLQGLPLDE NFQYTGGALF TFLTPYALLV GVMTLLLFMV 
HGGLYLLLKT HGDMHHRIEK RINYAYLGFL VVFTAVAIYS MLTPHLAENI ANNTALKVFP 
ALLLLSILSV AFFMKKKDYK KAFVGTILTI VFFMVVAALN LHPTFLRTTL ETGNSITVYN 
AAASQKSLKI MLTITAIGAP LLLLYTYFAY KVFWGKVEID ENSY