Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1462 |
Symbol | |
ID | 8367899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1725758 |
End bp | 1727245 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644983895 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003141569 |
Protein GI | 256820290 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAT TAGACCGCTA CATTATCACT CAGTTCCTTA CTAACTTTTT AGGAGCACTC TCTATACTTG TTCTTATCTT TGTATTCCAC ACAATCTTTA CATACATTGA TGAGCTAGCG GGGCGTGGTT TGGAGTTATG GATTATATTC AAGTTTCTAA TCTATTTTAT TCCGCAACTT ATCCCTATCA TTATGCCCTT GGCAGTGGTA ATAGCCTCTA TTATGACCTT TGGGGCATTT GCCGAAAACT ATGAGTTTGC TGCGATGAAA GCCTCAGGTA TTTCGCTAAT GCGCGTAATG CGTCCGCTGA TTATACTGAT GGCATTACTG AGTTTAGGCA CTTTCTTTTT AGCCAATAAT GTAATTCCAG TAGCTTATCG CGAGGTGTAT ACCCTTAGAT CGAACATTGC CAAAGTGAAA CCTGCTATGG CTATAGCCGA AGGTGTATTC TCTAACATAG GGGAGGATAT AAGCATAAAA GTAGGAAAAA AAAGAGGTGA TAATGACGAG TTTTTAGAGA ATGTGCTTAT TCACAAAAAG ACTCCCGATA AAGTAAATCG CACTGTAATC AATGCCAAGC GAGGAGAACT CAAGAGTTCT AAGACTAATA GCAACTTCTT ACAGCTTATT TTGGAAGACG GGACTTATTA CGAGGATATT AAAACCAACT CTTATGAAGC CCAACAAAAA GAACCTTTTG CCAAGGTATA CTTTAAAAAA TACATCATCA ATCTTGACCT TTCGCATTTG AACAATGTAG ATTTTAACGA GAAAACCGAT GCTACTACCT ATCGTATGAT GAATGTAGGA CAGCTTAATT ACGCTATCGA CTCACTCCGC ACCGATTTCA AGCAGAATAT TACTGACTAT GGTAATAATA TGTTTCGCCG TACAGGTTTC TCAGTAGCTC CTTCTACATC TCTTTCTTCC GAAGTTAAAA AACAAGAGAA ACCTAAACCT GCTAAGGAGA TTACTTCGGT GAGAGAGCTC TTTAACAAAC TGAACAACAC ACAAAAATCA ATGGTACTTG ATATGGCTAT CAATACCAAC CAAGCTCAGT TAGACAATGT GGAGTTCCGG CAAAGCGACC TTGAATATCG CTATAAGCTA ATGAACTTAC ACATTTTAAA TCTCAGCGAT AAGTTTGCTC TTACGGTAGC TTGTTTTGTG CTCTTTTTCG TAGCGGCACC TTTAGGAGCT TTCATTCGCA AAGGAGGGAT TGGAATGCCT TTGGTAATAG CAATGATACT GTTCTTAGCT TATTATTTTA TAGGAATGTT TATGAAAAAT ATAGCTGAGA ACAACACAAT TAACCCAGCC TTAGCACCGT GGATACCCGC TTTGATACTT CTGCCTTTGG GTATTTATCT CACTACAAGG GTTACTACTG ATAAAGAAGT GTTCAATTTC CCTATTACCA ATAAACTAAT GCGATTTGTA GAAGGCAAAG TGAAAGAAAT AAAAGGGAAA ATTAAAAAGA ACAAGTAA
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Protein sequence | MKILDRYIIT QFLTNFLGAL SILVLIFVFH TIFTYIDELA GRGLELWIIF KFLIYFIPQL IPIIMPLAVV IASIMTFGAF AENYEFAAMK ASGISLMRVM RPLIILMALL SLGTFFLANN VIPVAYREVY TLRSNIAKVK PAMAIAEGVF SNIGEDISIK VGKKRGDNDE FLENVLIHKK TPDKVNRTVI NAKRGELKSS KTNSNFLQLI LEDGTYYEDI KTNSYEAQQK EPFAKVYFKK YIINLDLSHL NNVDFNEKTD ATTYRMMNVG QLNYAIDSLR TDFKQNITDY GNNMFRRTGF SVAPSTSLSS EVKKQEKPKP AKEITSVREL FNKLNNTQKS MVLDMAINTN QAQLDNVEFR QSDLEYRYKL MNLHILNLSD KFALTVACFV LFFVAAPLGA FIRKGGIGMP LVIAMILFLA YYFIGMFMKN IAENNTINPA LAPWIPALIL LPLGIYLTTR VTTDKEVFNF PITNKLMRFV EGKVKEIKGK IKKNK
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