| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1454 |
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| Symbol | |
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| ID | 8367891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1715301 |
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| End bp | 1716167 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983887 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003141561 |
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| Protein GI | 256820282 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.179158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA TACGCATAGG TACACGCGAT AGTGAGTTGG CTCTCTGGCA AGCTAAAACG
GTACAAAACC AATTAAAAAC CTTAGGTTAT CCCACTGAGA TAGTAAGCAC TAAATCTCAC
GGAGATATAG AGCTAAGCAA ACCGCTCTAC GAAATGGGGG TTACCGGTAT CTTTACCAAA
GCGCTGGATA TTGCCTTGCT CAATGGCGAA ATAGATATTG CCGTACATAG TATGAAGGAC
GTACCCACGG CTTTACCTGA AGGAATTGCG GTAGGGGCAG TGCTCAAGCG CGGAAATCCT
CACGATGTAT TAGTATACAA GGGTGACCTT TCGTTTTTGG AGGCTGAAAT AGCAACTATA
GCCACCAGCA GTTTACGACG CAAGGCGCAA TGGTTACACC GCTACCCGCA TCATAATATA
GAGAGTTTAA GGGGAAATGT AAATACCCGC TTGCAAAAAC TCACCGATAA CCCTTGGAAT
GGGGCTATCT TTGCTGCTGC GGGCTTGGAA CGCATTAATA AATTACCTGA AAAACACTTG
GTGCTGGATT GGATGCTACC TGCACCTGCG CAAGGAGCTA TCGTAGTGGT GGTGCGCGAG
GATAACGTAG CCTTGCAGAA AAAACTACTC CCTCTCCACG ACGATTATAC TTATATAGCT
ACTCAGTTAG AACGCGATTT TCTTCGCGCT TTAGAAGGTG GGTGTACAGC ACCTATTGGA
GCTTTTGCTG AGTTTAAAGA TGATAAACTC TACTTCAAAG GAGGCTTGTG GAGCGAAGAT
GGCAAAGAGG CTTCGGTAAT AGACGAAGTT CTCACTCAAA TAGATGAATA TACCGGAGAA
AAACTTGCTA CAATGATAAA AGGTTAA
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| Protein sequence | MNTIRIGTRD SELALWQAKT VQNQLKTLGY PTEIVSTKSH GDIELSKPLY EMGVTGIFTK
ALDIALLNGE IDIAVHSMKD VPTALPEGIA VGAVLKRGNP HDVLVYKGDL SFLEAEIATI
ATSSLRRKAQ WLHRYPHHNI ESLRGNVNTR LQKLTDNPWN GAIFAAAGLE RINKLPEKHL
VLDWMLPAPA QGAIVVVVRE DNVALQKKLL PLHDDYTYIA TQLERDFLRA LEGGCTAPIG
AFAEFKDDKL YFKGGLWSED GKEASVIDEV LTQIDEYTGE KLATMIKG
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