| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1438 |
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| Symbol | |
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| ID | 8367870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1687028 |
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| End bp | 1689079 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983866 |
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| Product | TGF-beta receptor type I/II extracellular region |
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| Protein accession | YP_003141545 |
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| Protein GI | 256820266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA AGACAATTTT CGATACACAA GTATTAGGAC ATCCAGCGGG GCTGTTTGTG
CTCTTCTTTA CAGAAATGTG GGAGCGTTTT TCGTTTTATG GAATGCGCGT ACTGCTCATC
AACTTTCTTA CAATGACGCT TATAGGGTAT AACCCAGGAT GGGCGTGGAG TACTGAAAAC
GCGGGTGCAC TCTTTGGTAC GTATGTTATG CTTCTTTACC TCACTCCTAT ACTTGGAGGT
ATAATAGCCG ATAAGATTAC CGGCTACCGC TGGGCAGTAA TTATTGGGGC GGTTATTATC
ACCTTAGGAC ACGTATCGAT GGCTTTTGAA ACTGAGGTTT CGCTCTATTT GGGACTTGCA
CTCTTGGTGA TAGGAACGGG CTTTTTCAAA CCTAATATGG TGTCATTTGT ATCGGAAATG
TACAAAGACC TACCCGAGAA GAAAGATGCT GCTTATACCA TCTTCTATAT GGGAGTAAAT
TCTGGAGCTT TCTTTGGAAT GATGCTCTGC GGTTACTTGG CAGAACGCAT TGGGTGGAGT
TGGGGTTTCG GTTTAGCAGG AGTGTTTATG CTCTTGGGAA CTATACAGTT TTGGTTTGCC
AAACCTTTAT TTGGTTCAAT AGGATGTGAG CCACGCAAGC AAGAAAAAAA AGAGACTACA
AATGATGCAA AACAAGAAGA GGAAAAACTC AATCCGTTTA CTACCCTAGA TAAGATATTG
GTAGCGCTTT CGGCAATCAT AGGTATTGGC TATGCACTAA ACGACCCTCT CTCAAAAATA
TGGAATATCG ACCTCTTTGG GTGGGCTGCT ACCTCAGGGC TTAAAGGGCA ATATGTGATG
GTGATTGTAG GCTTAATAGC TTTCTTTTAC CTGATAGGTA GTCGCATAAT GCGTTATACT
ACGATAGTGC GCGACCGTAT GCTCACTGTG GTCATCTTTG CCTTTTTTGT GGTGTTCTTT
TGGTTGTCGT TTGAACAAGG AGCTTCGTCT TTGGTGATTT TTGCACGGGA TAATATAGAG
CGTGAGCTAC ACGGTAATTG GGCAGTACTT TACAATATTT TCAATGCGCT ACTCACCGTG
ATTCCACTAT TACTGATTAC CTACGTACTT TTCCTTTTGA TAAAGAAAAC CTACAAAAAG
ATATTTCCTG CCGTAGTAGT GTTATTGGTG TGCTTTAGTC TTGTATGGGG CATTGCTTCG
TGGATGCTAC AACGCGACTT CAAAACTACA GCTTACAGTG TGAGTTATCA AGCCTATGAA
CAAACCGATA CACAAGGCAG AACTACTTAT ATCCCTATTA CTGAAGAAAA CAGAGTCGCT
CGCCCTGATT TGAAAATCGT AGAACGTACT ACTATCATAG GAGTAGCTGA TTATCACCTA
AAAGTAGGGC AAGAGATAAA ATTGCTGAGC AAGAACAACA AAAACACTTC GTTTGGCTAT
GTAGATGCCG AAAAGGAACA GTGGGCAAAA CAGCGGGGAG CAGAGCTCAA TACTGACAAC
GGGCTGATAG TTGCACAAGT GAAAGAAGAG CGCGATAACT GGGTAGAGAC GACTGTATCG
TGGTTTTCTA TTCTGAATTC TTTCTTCATT ATTGCCTTAG CGAGCTTGTT CTCACGTTGG
TGGGATAGCA AGTATAATCC ACCTGCTGCG ATGAAATACG GCATCGGACT GCTGATGCTC
TCAGTAGGGT TTGGTTTACT CGCCTTAGGC TCTCACGGGG TAACTCACGG AGTAAAGGTG
AGTATGTTAT GGCTTGTATT TGCTTATATG TTTAACACTA TGGGTGAGTT GTGTTTATCG
CCTGTGGGGC TTTCGTACGT CTCGAAGCTT GTACCTGCAC GAATGATAGC ATTTATGTTT
GGGGTATGGT ACCTTGCTGT AGCTATTGGT CATAAATTAG CAGCTGTACT GGGCGGACAG
ATAGAGAATA TCACCCGTGA GTACAGTTTG AGTACTTTCT TTTTGATATT TACCATTGTG
CCTGCCGTAG CAGGGGTACT CATTATTCTC ATCAATCCGT TTGTGAAGAA ACTGATGCAC
GGAGTGAGGT AA
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| Protein sequence | MTKKTIFDTQ VLGHPAGLFV LFFTEMWERF SFYGMRVLLI NFLTMTLIGY NPGWAWSTEN
AGALFGTYVM LLYLTPILGG IIADKITGYR WAVIIGAVII TLGHVSMAFE TEVSLYLGLA
LLVIGTGFFK PNMVSFVSEM YKDLPEKKDA AYTIFYMGVN SGAFFGMMLC GYLAERIGWS
WGFGLAGVFM LLGTIQFWFA KPLFGSIGCE PRKQEKKETT NDAKQEEEKL NPFTTLDKIL
VALSAIIGIG YALNDPLSKI WNIDLFGWAA TSGLKGQYVM VIVGLIAFFY LIGSRIMRYT
TIVRDRMLTV VIFAFFVVFF WLSFEQGASS LVIFARDNIE RELHGNWAVL YNIFNALLTV
IPLLLITYVL FLLIKKTYKK IFPAVVVLLV CFSLVWGIAS WMLQRDFKTT AYSVSYQAYE
QTDTQGRTTY IPITEENRVA RPDLKIVERT TIIGVADYHL KVGQEIKLLS KNNKNTSFGY
VDAEKEQWAK QRGAELNTDN GLIVAQVKEE RDNWVETTVS WFSILNSFFI IALASLFSRW
WDSKYNPPAA MKYGIGLLML SVGFGLLALG SHGVTHGVKV SMLWLVFAYM FNTMGELCLS
PVGLSYVSKL VPARMIAFMF GVWYLAVAIG HKLAAVLGGQ IENITREYSL STFFLIFTIV
PAVAGVLIIL INPFVKKLMH GVR
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