Gene Coch_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1436 
Symbol 
ID8367868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1683945 
End bp1684577 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content35% 
IMG OID644983864 
Producthypothetical protein 
Protein accessionYP_003141543 
Protein GI256820264 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.341725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCATT TTTTCAAATC CATCAGAAGA TCAGTAAAAC ACTGGTACAT TCACCTTATT 
TTAGGGATTT TGTTCATTCT TTGTGGTATA GGAGTAATTA TATCACCACA AGCTTCTTAT 
CTTACCCTTT CAGTACTCTT TAGTCTCTCA TTCTTAATAT CAGGGATAAC TGAGTCCTTC 
TTTGCCTTAC AGAATACTAA AAATCTCAAT GGTTGGGGGT GGTATTTGGT AAGCGGACTC 
ATTTCATTGA TAATGGGTAT CTTTTTACTT ATGTATCCTG CCCTATCAAT GTTTATATTA 
CCATTGGTAG TAGGTTTTAC GTTGCTATTC CGTTCGTTTC AGCTACTCGG TTTTGCCTTC 
GAAGAAAAAG AAGCAGGCGT ACTGAATTGG GGGAACTTAG CCATAGTGAG CGTATTGAGT 
ATTATCCTCT CGTTCATTTT GATTGCTAAT CCTATCTTTA CAGGTATCTC ATTAGTAGTA 
TTCACAGGTT TAGCATTTAT CTTCACAGGT ATTTCATCTG TAATACTTTC GTTCAATCTG 
AAAAAGTTAA AAAGTTCTGC TCAAAAGTTA TCAGATGATT TAAAGAACCG TATAGAAGAC 
CTCGAAAAAG AAGTGAGAGA AGCCTTAAAA TAA
 
Protein sequence
MLHFFKSIRR SVKHWYIHLI LGILFILCGI GVIISPQASY LTLSVLFSLS FLISGITESF 
FALQNTKNLN GWGWYLVSGL ISLIMGIFLL MYPALSMFIL PLVVGFTLLF RSFQLLGFAF 
EEKEAGVLNW GNLAIVSVLS IILSFILIAN PIFTGISLVV FTGLAFIFTG ISSVILSFNL 
KKLKSSAQKL SDDLKNRIED LEKEVREALK