Gene Coch_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1426 
Symbol 
ID8367858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1672038 
End bp1672739 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID644983854 
Productmembrane protein containing cytochrome c domain protein 
Protein accessionYP_003141533 
Protein GI256820254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATC AATTGAAAAA GATTATCATT ATATCAACCC TTATTATTGC CTTTTTGGGC 
ATTACTTACG CTCTTTACGC CTTTCTGATG CAGATAGGGG TAGACGAGGG CTATGAACCT 
ATACAACCTA TTCACTTCTC TCACAAAATT CACGCGGGTG ATAACCAAAT CGATTGTAAA 
TATTGCCATT CAGGGGCACG GACTTCAGCA GTAGCAGGTG TGCCCTCACT CAATGTATGT 
ATGGGTTGCC ATAATACCAT TTCGGAATAT GAGGGTGAGG AGGATCTCAC CAATGGTTAC 
ACTAAGGAAT TTTACACTAA AGAAATCAAG AAATTATACG AAGCAGTAGG CTGGGACGAG 
CAGAAGTTTC GCTATACGGG CACTTCTAAA CCTGTGCAGT GGATACGCAT TCACAAACTC 
CCCGACTTCA CTTATTTCAA TCACAGTCAG CACGTAGCTG TAGGTGGATT GGAATGTCAG 
AAATGTCACG GCGAAGTACA ACAAATGGAG GTGGTACACC AGTACGCTCC TCTTACGATG 
GGGTGGTGTA TAAACTGCCA CCGCCAAATG CCTGTGAATG CTAACAATCC TTATTATCAG 
CACTATGAAG AAGTGCACAA GGCTTTGGCT AAAAAGTTAA ATGTTAGCAA ACTAACCGTT 
GCCCAAATGG GAGGCTTAGA ATGTGCTAAA TGTCACTACT AA
 
Protein sequence
MNYQLKKIII ISTLIIAFLG ITYALYAFLM QIGVDEGYEP IQPIHFSHKI HAGDNQIDCK 
YCHSGARTSA VAGVPSLNVC MGCHNTISEY EGEEDLTNGY TKEFYTKEIK KLYEAVGWDE 
QKFRYTGTSK PVQWIRIHKL PDFTYFNHSQ HVAVGGLECQ KCHGEVQQME VVHQYAPLTM 
GWCINCHRQM PVNANNPYYQ HYEEVHKALA KKLNVSKLTV AQMGGLECAK CHY