| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1418 |
|---|
| Symbol | |
|---|
| ID | 8367850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1659745 |
|---|
| End bp | 1661376 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644983846 |
|---|
| Product | peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase |
|---|
| Protein accession | YP_003141525 |
|---|
| Protein GI | 256820246 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4927] Predicted choloylglycine hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCTTACTTCT TACTTTTTAC CTCCTGCTCA CCTCTTGCGG TATTTTCTAC
AAGAAAATCA CTCCGCCTGA GGTAACCTAT CCGTACCAGA AACCTCAAAT TACCGTACTA
AATGATACGT TGCGGTATTT TCAGGATAAC TATATTGCGA AAAATCAACA AGGCTTGTGG
GAGCTCTACC TTTCAGGAAA TCCGTATCAG TTAGGGCTCA ATTCGGGCGC ACTTACTGAG
CCTTTGTACC ACCGTCAGGA CAGTCTGCTC TTTGTCAAAC TCAATCAGTT TGTGCCTTCA
CAACGCAAAC AGCGTTTTTT GCGCAAGTTC GTCAAGTGGT TCAATCGAGA TATCAATAAT
TGTGTGATAC CCCCCTTCCG GCAAGAACTC TGGGGACAAG CGCAGTACTC CGATACGATT
TTCAACTACA TAGCCCCTGT TTATCAGCGT ACCCTTTACC TGCATTCGGC TCACGATTTA
GGGCACGCTT TGCAAGATTT GATGCTCGTA GGCTGTTCTT CGTTAGCGGT TTGGGGCGAT
AAAACCGAAG ATGGTCAACT CCTCATAGGA CGCAATTTCG ATTTTTATCT CTCCGATGAC
TTTGCTACTG AAAAAATAGT GCGATTTGTG CGCCCTGAGG AAGGTATTCC TTTTATGAGT
TACGCTTGGG GCGGAATGAT AGGTGTGCTC TCGGGTATGA ACCTCGAAGG TCTTACGGTT
ACTATCAATG CGGGAAAGTC GTCTATTCCG CTGAAAGCTC GCACCCCTAT TTCGCTCCTC
TGCCGTGAAA TCTTGCAGTA TGCCAAAAAT ATCGATGAGG CGATTGCCAT TGCTAAAAAG
CGAAAGGTAT TCGTGTCCGA AGCTATAATG GTGGGGAGTG CTACCGACGG CAAAGCAGTA
ATCATCGAGG TATCACCCAA AAAGTTTGGG GTGTACGAAG CTCCTAATGC AGTGCTTTGC
GCCAATCATT TCCAAAGTGA AGTGTACAAG AAAGATAAGA AGAATCTCAA ACAGATACGC
ACTTCGCATT CAGCGTATAG ATATGCCAAA ATGCAGGAGT TCCTAACAGA AGAACCTAAG
CTGACCCCTT CTAAAATAGC TACACTCCTC CGCAGTACCG AAGGCTTACA CGCCGACTCC
ATAGGCTATG GCAATGAGAA AGCGCTCAAC CAGCTATTGG CACATCACGC AGTAATTTTT
AAACCTCAAG AACGCTTGGT ATGGGTATCG ACAGCTCCTT ATCAGTTGGG CACTTTTGTA
GCCTATGATT TGAAGCAGAT ATTTGCTACC AAAGCTTACC CGTCGCATAG CCCTTATCCT
CAAACTTCCT TAAATATTCC GCCCGACCCT TTTATGTACA CCCAAGCGTT TAAGGATTAC
GAAGCGTATA GGGTATTAGA GCAACAGATA GAAACACATT TGCGCGAACA TACCCCTATT
GTAATAGACG AAGTAAAGCC CATAACAAGT CTCAACCCGC ATTATTGGAA AGCCTATTAT
TTATTAGGGC GAGCTTATCA AACACAAGGT AACAAAGAAA CCGCACACCA ACTCTTCCAA
AAAGCCCTCC AATGCGAAAT ACCGTATAGT GAAGAACGAG AGAAGATTCA AAAGTTAGTC
AATAAAAATT AG
|
|---|
| Protein sequence | MKKLLLLTFY LLLTSCGIFY KKITPPEVTY PYQKPQITVL NDTLRYFQDN YIAKNQQGLW
ELYLSGNPYQ LGLNSGALTE PLYHRQDSLL FVKLNQFVPS QRKQRFLRKF VKWFNRDINN
CVIPPFRQEL WGQAQYSDTI FNYIAPVYQR TLYLHSAHDL GHALQDLMLV GCSSLAVWGD
KTEDGQLLIG RNFDFYLSDD FATEKIVRFV RPEEGIPFMS YAWGGMIGVL SGMNLEGLTV
TINAGKSSIP LKARTPISLL CREILQYAKN IDEAIAIAKK RKVFVSEAIM VGSATDGKAV
IIEVSPKKFG VYEAPNAVLC ANHFQSEVYK KDKKNLKQIR TSHSAYRYAK MQEFLTEEPK
LTPSKIATLL RSTEGLHADS IGYGNEKALN QLLAHHAVIF KPQERLVWVS TAPYQLGTFV
AYDLKQIFAT KAYPSHSPYP QTSLNIPPDP FMYTQAFKDY EAYRVLEQQI ETHLREHTPI
VIDEVKPITS LNPHYWKAYY LLGRAYQTQG NKETAHQLFQ KALQCEIPYS EEREKIQKLV
NKN
|
|---|
| |