| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1408 |
|---|
| Symbol | |
|---|
| ID | 8367840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1651023 |
|---|
| End bp | 1651508 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644983836 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003141515 |
|---|
| Protein GI | 256820236 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.100855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT TTCTTAACGC TCAGGAATCC CGAAAGAACA ATCGCACTAA AAATATTGTT
GCAGTAATAG TGGGTGTGGT GTCTTTTATT GTGGTATTTT TAGCAGCATT CTTTACGACG
CGCTATCTCA CAAGCTCCTT CTTTTCAAAA GCTAAAAACG ATTTAGTTAC CGATGAGATG
AAGAATCAAG TAGCCGAAAT AAACCGGCAA TTACCACAAA TAATAGAAGA GGGGGTGCGC
TTAGATAGTG TTGCCCTAAA AGGGGAAAAA ACTATGGGGT ATTATGCAAC CCTTTTTAAT
TTCGATTCCG AAGGAGTAGA GTTCGACGCA TCAGCAGCTA AGGAAGCCAT TGTACAAAAC
CTAAGAACCA ATCGCGGGAA GATGCGTTTT TTCATTGATA ACAATATAAC ACTGTACTAT
TATTACTACG ATAAAAACAA AAAAGTTGTA ACCGAAATAG AAATAGCCCC ATCACTCTAC
AAATAA
|
|---|
| Protein sequence | MNDFLNAQES RKNNRTKNIV AVIVGVVSFI VVFLAAFFTT RYLTSSFFSK AKNDLVTDEM
KNQVAEINRQ LPQIIEEGVR LDSVALKGEK TMGYYATLFN FDSEGVEFDA SAAKEAIVQN
LRTNRGKMRF FIDNNITLYY YYYDKNKKVV TEIEIAPSLY K
|
|---|
| |