Gene Coch_1394 details

Gene Information

• Locus tag: Coch_1394
• ID: 8367826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 1638773
• End bp: 1640875
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 644983822
• Product: hypothetical protein
• Protein accession: YP_003141501
• Protein GI: 256820222

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.872498
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TTATTATCAC TATTGTATGT ATGTTGTGTG CTGCGCCTCT TCTTTTTGCA 
CAAACCCTTT TATCTCCTAA CGAGAACCTC AAACTCTCAT TTCGGCTTAA TGAAAAAGGT 
ACGCCTACTT ATGCCTTAAC TTTCAAAGGC AAAACAGTCA TCAGTGAGAG TACTCTGGGG 
TTTGTAATCA ACCAAAAGGA GGATTTCAAC AGCAATTTTG AAATCACAGA TGTTCAATTT 
GCTGAAGCTA ATAGTGTATG GCAACCCGTA TTGGGCGAAA ACAAAGAAAT ACGCGACCAT 
CACAAAGAAA TGTTAGTGCA CCTCACTCAG AAAAACAACG GACAACAATT GAACTTGCGC 
TTTCGCTTGT TCAACGACGG TTTAGGTTTC CGCTATGAAT TTCCAGTGCA ATCTAACTTC 
CGTCACTTTA GAATTCAAGA AGAGCTTACT GTTTTTCAGC TTTCGGGTAA CCACAAGGCT 
TTTTGGATTC CCGCTGACTA CGACACCAAC GAGTTCCCTA TTACCACTTC TGCCATTTCG 
GAAATTCCTA AACTTATCGA CAAAGTGCGC GAAGAGCCTT TGGCTGCCAA AGCACCTACT 
CCTAATGTAG CCGTACAAAC TCCCTTGATG CTCAAATCGA GTGATGGATT GTACATCAAT 
CTGCACGAAG CTGCTTTGGT GAATTACCCT GCGATGATGC TCAACGTCAG TGCTACCAAA 
CATCAGTTAT CAGCTCATTT AGTCCCCGAT AAGAATGGGG TAAAAGGCTA TGTTCAAACG 
GGTAGCGTAA CACCTTGGCG CACGATAGTA GTAAGCGATG ATGCCCGTGA TATTTTAGCT 
TCTAACCTTA TCCTCAACCT CAACGAACCC TGCAAAATCA CCGATACTTC TTGGATTCAC 
CCTACCAAAT ACATAGGCGT TTGGTGGGAG TATTTCATAG GAGGCGGCAG TACGTGGGCT 
TACTCCGATG ACCGCGATAT TACCATTGGC GTTACCGATT ACCAAAAACT AAAACCTAAC 
GGACATCACG GAGCTAATAC CGAGCACGTG AAGAAATACA TCAACTTTGC CGCTCAACAC 
GGTTTTGATG CCGTTCTTGT GGAAGGTTGG AACGAGGGTT GGGAAGATAA TTATGCTTAC 
GACAAAGAGC GCATCTACAG CTTTACCAAA GCCTACCCCG ATTTTGATGT GAAAGCACTA 
CACCAATACG CCGCTGCCAA AGGAGTAAAA CTGATTATGC AACACGAAAC TACCTCCTCA 
GTAGTTGATT ACGAACGCCA CCTACACGAG GCTTTCCGCT TTATGAAAGA CAATGGTTAC 
GACGCCGTGA AAACAGGCTA TGTTGGACCT ATCATTCCGC GCAGCGAATA CCACGACGGA 
CAATGGATGG TAAACCACTA CAACTATGTA GCCGAAACCG CTGCTAAGTA CCGCATAATG 
GTCAATTCAC ACGAGGCGGT GCGACCTACC GGTATGAGCC GTACTTATCC TAACTGGGTA 
GCCCAAGAGA GTGCACGCGG TACCGAATTT GAGTCGTTCA ACGGCAATCG CCCCGAACAT 
ACTACTATCC TCCCCTTCAC CCGCTTAATG GGTGGCGCTA TGGATTATAC CCCTGGTATT 
TTTGAAGGCG ATTTGAGACG ATATGGCAAC AACAAAGCCA AACGTAGCAC TACCCTTGTG 
AAGCAGTTGG CACTCTACGT AACAATGTAC AGTCCGTTAC AAATGGCAGC CGACTTGCCC 
GAGAACTACG AAAAACACCT CGATGCTTTC CAATTTATCA AAGATGTAGC AGCCGACTGG 
GATAATACTT ACATTTTAGA AGCCGAACCC GGCGATTACA TCACCATTGC CCGCAAATCT 
AAAGGTAAAA ACGAGTGGTT CATAGGTGCT ATCACCGATG AAAACGCCCG TGAAGCTCTC 
ATCGATTTCA GCTTTCTACC CAAAGGAAAA ACCTATACCG CTACCCTCTA CACCGACGGT 
AAAAATGCCG ATTGGCGTAC CAATCCCAAT AGTTACTCCA TCAAAACAAT GAAAGTAACT 
CAAAAAACCA AACTCAAACA ACGCCTTGCC CCCAGTGGCG GCTTGGCTAT AAGTATCAAG 
TGA 

 

Protein sequence

MKKFIITIVC MLCAAPLLFA QTLLSPNENL KLSFRLNEKG TPTYALTFKG KTVISESTLG 
FVINQKEDFN SNFEITDVQF AEANSVWQPV LGENKEIRDH HKEMLVHLTQ KNNGQQLNLR 
FRLFNDGLGF RYEFPVQSNF RHFRIQEELT VFQLSGNHKA FWIPADYDTN EFPITTSAIS 
EIPKLIDKVR EEPLAAKAPT PNVAVQTPLM LKSSDGLYIN LHEAALVNYP AMMLNVSATK 
HQLSAHLVPD KNGVKGYVQT GSVTPWRTIV VSDDARDILA SNLILNLNEP CKITDTSWIH 
PTKYIGVWWE YFIGGGSTWA YSDDRDITIG VTDYQKLKPN GHHGANTEHV KKYINFAAQH 
GFDAVLVEGW NEGWEDNYAY DKERIYSFTK AYPDFDVKAL HQYAAAKGVK LIMQHETTSS 
VVDYERHLHE AFRFMKDNGY DAVKTGYVGP IIPRSEYHDG QWMVNHYNYV AETAAKYRIM 
VNSHEAVRPT GMSRTYPNWV AQESARGTEF ESFNGNRPEH TTILPFTRLM GGAMDYTPGI 
FEGDLRRYGN NKAKRSTTLV KQLALYVTMY SPLQMAADLP ENYEKHLDAF QFIKDVAADW 
DNTYILEAEP GDYITIARKS KGKNEWFIGA ITDENAREAL IDFSFLPKGK TYTATLYTDG 
KNADWRTNPN SYSIKTMKVT QKTKLKQRLA PSGGLAISIK