Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1388 |
Symbol | |
ID | 8367820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1628849 |
End bp | 1630507 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644983816 |
Product | hypothetical protein |
Protein accession | YP_003141495 |
Protein GI | 256820216 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.692819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT TCAATAAAAA TATAGCAGTT GTAGCATTAT CAGGTATATT ACTCGGCGCT TGTACTAAAG ATTTTGCCGA TGTAAATACT AATAAAACAC AACCTACCGA TGAGGATATT AACCGTGGTG GCTATGCCTC TGGTGGATAT TTTACCGAGC TGGTACAACG CCCGATCCCT ACAGGAGTAG GTGTTAACCC TGCTAACGAC TATCAAGTAG TACAAAATAT GAGTACTGAT AACTGGGTAG GTTACTTCTC TCCAGGGCGT AATCACTGGG ATAATGGTAA TAACCAAACC AGTTACTATG TGTCCGACTT CCGTGCCAAT GGTACTTTCT CTACACTTAT TACAAAAGTG ATGAACCCTT ATTTTGAGAT TAAAAACCGC TTGCACAATG TCCAAACTGT AAATGGTAAA TTGATGTATA CCCCTAAAGA TTTGACAAGC CAAGCTGCTT ATTCTTTAGC ACAAATCGTA AAAATAATGG CTATGCATCG CGCTACCGAC CTCTTTGGTC CTATCCCTTA TAGCGATATG GAACCTGGTA AAATCAAAGC TAAATACGAT AGCCAAGAAA AAGTTTACAA ATCTTTCTTA AAAGAATTAG ACGATGCAGT AACCATACTC AACCAATATG GAGCTAACAA CAAAGTGTTA GAAAACTTCG ACCCTGTCTA CCAAGGAGAT ACTGCTAAAT GGATACGCTT AGCCAATTCA TTGATGTTGC GCTTAGCAAT GCGTGTACGC TTTGCTGACC AAGCACTCGC TCAACAATAT GTAATCAAAG CTACTACGAA TCTTGGTGGA CTTATTGAAG ACGATTCTCA AGCAGGTAAG TTAGTAACCT CTAGTAAATA TATTTTCGAC CATTCCTTGG TAACTATGTT AGGTTATGGA GAGCTTAAAA TGGGGGCGAC TATCTATTCT TACCTAAAAG GATATGACGA TCCTCGTATG GCTAAATACT TTACCAAAGC AACTGCCGAT ACTCAAACCT CCGATTTCTA CGCCGTACGC TCTGGTATCG ACCCTACCAC CGATGTAGCT GTTTACAAAA ACTTCTCAGT ACCTACTGTA GTACAAACTA CTCCTACCTA TTGGTTGCGC GCTTCCGAAG TACAATTCTT ACTCGCCGAA GCTGCTTTGA TAGGATGGTA TACTAACGAT ACTGCCGAAA ATTTGTACAA AAAAGGTATT GAAGTATCTT TCGCCGAAAA TGGTTTAACT GCTGCTCAAG CGCAAAGCTA TTACAATAGT AGTGCTCAGC CTGCTAACTA TGCCGACCCT AAAAACTCTG TTTACAACAT CAGTGCAGCG AGCACTATTG ATAAAAAATG GCTCACCAGC GGTAGTACTG AAGACCATTT AGAGCAAATT ATCACTCAAA AATACCTCGC TAACTATCCT AATGGTTTCG AGTCTTGGAG TGAATGGCGT CGTACGGGCT ACCCTCGTAT GTTTACAGCC GCTTTAAACA GAACCAATGT AGGAGTGCAA AATATCCCTG CTTCTGGTAA AGATTTCGGT ATGCGTCGTT TCCCATTCCC TGAAAATGAA TTTAAACAAA ACAGAGAAAA CGTTACAGTT GCTCAAAGCC TCTTAGGTGG TACTGATAAC GCTGCTACTA ACGTATGGTG GGACAAAAAA ACTAAATAA
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Protein sequence | MKIFNKNIAV VALSGILLGA CTKDFADVNT NKTQPTDEDI NRGGYASGGY FTELVQRPIP TGVGVNPAND YQVVQNMSTD NWVGYFSPGR NHWDNGNNQT SYYVSDFRAN GTFSTLITKV MNPYFEIKNR LHNVQTVNGK LMYTPKDLTS QAAYSLAQIV KIMAMHRATD LFGPIPYSDM EPGKIKAKYD SQEKVYKSFL KELDDAVTIL NQYGANNKVL ENFDPVYQGD TAKWIRLANS LMLRLAMRVR FADQALAQQY VIKATTNLGG LIEDDSQAGK LVTSSKYIFD HSLVTMLGYG ELKMGATIYS YLKGYDDPRM AKYFTKATAD TQTSDFYAVR SGIDPTTDVA VYKNFSVPTV VQTTPTYWLR ASEVQFLLAE AALIGWYTND TAENLYKKGI EVSFAENGLT AAQAQSYYNS SAQPANYADP KNSVYNISAA STIDKKWLTS GSTEDHLEQI ITQKYLANYP NGFESWSEWR RTGYPRMFTA ALNRTNVGVQ NIPASGKDFG MRRFPFPENE FKQNRENVTV AQSLLGGTDN AATNVWWDKK TK
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