Gene Coch_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1388 
Symbol 
ID8367820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1628849 
End bp1630507 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content40% 
IMG OID644983816 
Producthypothetical protein 
Protein accessionYP_003141495 
Protein GI256820216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.692819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TCAATAAAAA TATAGCAGTT GTAGCATTAT CAGGTATATT ACTCGGCGCT 
TGTACTAAAG ATTTTGCCGA TGTAAATACT AATAAAACAC AACCTACCGA TGAGGATATT
AACCGTGGTG GCTATGCCTC TGGTGGATAT TTTACCGAGC TGGTACAACG CCCGATCCCT
ACAGGAGTAG GTGTTAACCC TGCTAACGAC TATCAAGTAG TACAAAATAT GAGTACTGAT
AACTGGGTAG GTTACTTCTC TCCAGGGCGT AATCACTGGG ATAATGGTAA TAACCAAACC
AGTTACTATG TGTCCGACTT CCGTGCCAAT GGTACTTTCT CTACACTTAT TACAAAAGTG
ATGAACCCTT ATTTTGAGAT TAAAAACCGC TTGCACAATG TCCAAACTGT AAATGGTAAA
TTGATGTATA CCCCTAAAGA TTTGACAAGC CAAGCTGCTT ATTCTTTAGC ACAAATCGTA
AAAATAATGG CTATGCATCG CGCTACCGAC CTCTTTGGTC CTATCCCTTA TAGCGATATG
GAACCTGGTA AAATCAAAGC TAAATACGAT AGCCAAGAAA AAGTTTACAA ATCTTTCTTA
AAAGAATTAG ACGATGCAGT AACCATACTC AACCAATATG GAGCTAACAA CAAAGTGTTA
GAAAACTTCG ACCCTGTCTA CCAAGGAGAT ACTGCTAAAT GGATACGCTT AGCCAATTCA
TTGATGTTGC GCTTAGCAAT GCGTGTACGC TTTGCTGACC AAGCACTCGC TCAACAATAT
GTAATCAAAG CTACTACGAA TCTTGGTGGA CTTATTGAAG ACGATTCTCA AGCAGGTAAG
TTAGTAACCT CTAGTAAATA TATTTTCGAC CATTCCTTGG TAACTATGTT AGGTTATGGA
GAGCTTAAAA TGGGGGCGAC TATCTATTCT TACCTAAAAG GATATGACGA TCCTCGTATG
GCTAAATACT TTACCAAAGC AACTGCCGAT ACTCAAACCT CCGATTTCTA CGCCGTACGC
TCTGGTATCG ACCCTACCAC CGATGTAGCT GTTTACAAAA ACTTCTCAGT ACCTACTGTA
GTACAAACTA CTCCTACCTA TTGGTTGCGC GCTTCCGAAG TACAATTCTT ACTCGCCGAA
GCTGCTTTGA TAGGATGGTA TACTAACGAT ACTGCCGAAA ATTTGTACAA AAAAGGTATT
GAAGTATCTT TCGCCGAAAA TGGTTTAACT GCTGCTCAAG CGCAAAGCTA TTACAATAGT
AGTGCTCAGC CTGCTAACTA TGCCGACCCT AAAAACTCTG TTTACAACAT CAGTGCAGCG
AGCACTATTG ATAAAAAATG GCTCACCAGC GGTAGTACTG AAGACCATTT AGAGCAAATT
ATCACTCAAA AATACCTCGC TAACTATCCT AATGGTTTCG AGTCTTGGAG TGAATGGCGT
CGTACGGGCT ACCCTCGTAT GTTTACAGCC GCTTTAAACA GAACCAATGT AGGAGTGCAA
AATATCCCTG CTTCTGGTAA AGATTTCGGT ATGCGTCGTT TCCCATTCCC TGAAAATGAA
TTTAAACAAA ACAGAGAAAA CGTTACAGTT GCTCAAAGCC TCTTAGGTGG TACTGATAAC
GCTGCTACTA ACGTATGGTG GGACAAAAAA ACTAAATAA
 
Protein sequence
MKIFNKNIAV VALSGILLGA CTKDFADVNT NKTQPTDEDI NRGGYASGGY FTELVQRPIP 
TGVGVNPAND YQVVQNMSTD NWVGYFSPGR NHWDNGNNQT SYYVSDFRAN GTFSTLITKV
MNPYFEIKNR LHNVQTVNGK LMYTPKDLTS QAAYSLAQIV KIMAMHRATD LFGPIPYSDM
EPGKIKAKYD SQEKVYKSFL KELDDAVTIL NQYGANNKVL ENFDPVYQGD TAKWIRLANS
LMLRLAMRVR FADQALAQQY VIKATTNLGG LIEDDSQAGK LVTSSKYIFD HSLVTMLGYG
ELKMGATIYS YLKGYDDPRM AKYFTKATAD TQTSDFYAVR SGIDPTTDVA VYKNFSVPTV
VQTTPTYWLR ASEVQFLLAE AALIGWYTND TAENLYKKGI EVSFAENGLT AAQAQSYYNS
SAQPANYADP KNSVYNISAA STIDKKWLTS GSTEDHLEQI ITQKYLANYP NGFESWSEWR
RTGYPRMFTA ALNRTNVGVQ NIPASGKDFG MRRFPFPENE FKQNRENVTV AQSLLGGTDN
AATNVWWDKK TK