| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1387 |
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| Symbol | |
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| ID | 8367819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1625804 |
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| End bp | 1628830 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983815 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141494 |
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| Protein GI | 256820215 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.840954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA AAATATCAAT GCTAATGTTC GTTTTTGCAT TGTTTGGCGG TGCGCTAATG
GCACAAACGA AAGTAACTGG TACAGTTACA GGCAGTGATG GTATGCCACT GCCAGGTGTA
AGTGTTGTGA TTAAAGGTAC AACACGTGGT GTTTCAACTG ACTTTGACGG GAAGTATGAA
CTACAAGCAG CTGCTAATGA AACTATTGAG TACAGCTTCT TGGGGTATAG TACTCTGCAA
AGAAAAGTTA CGAAAGCGAG CGGTACTCTT ACTTTAGATG TGGTGTTACA AGAAGAAGCA
CAACAACTTG GTGAAGTAGT GGTAACCGCT TTGGGTATTA AACGCCAAGA AAAAGCCTTG
AGTTATAACG TACAACAAGT GAAGTCGGAA GAACTTACCA AAGTGAAAGA CGTGAACGTG
GTAAATAGCC TCAACGGTAA AGTAGCGGGG GTGAATATCC AACGTAGTTC TTCTGGGGTA
GGTGGTTCTA CCAAAGTGGT AATGCGTGGT CTCAAATCAT TGGACGGTAA TAACGGTGTA
CTTTATGTAA TTGATGGGGT GCCACTCTTC AATAAACAAA GTGATGGTGG TGGTAATAAC
TTCGGTCGTC CAGGTGGAGG AGAAGGTATT TCAGATATCA ACCCTGAGGA TATCGAAAGT
ATCAACGTAC TTACAGGTCC TTCGGCAGCA GCTTTGTACG GTAGTGAAGC CGCTAACGGG
GTAATCCTTA TCAACACTAA AAAAGGTAAA GAAGGTAAAA CTGAAGTAAA CCTATCCAGC
AGTGTAGAGT TGATGACTCC TATATTATTA CCTGAATTCC AAAATACTTA TGGTAGTAAT
GGTGATAAAA GCTGGGGAGC TAAATTAGCA ACACCTTCTA CTTTCGAACC TCGTAAATTC
TTCAATACAG GTACAAACTT TATGAACTCT GTTACCTTCT CTACAGGGAA CGCTCAAAAC
CAAACTTTTG TATCGGCTGC ACAAACCAAT GCCGAAGGTC TCATTCCTAA CAACGCTTAC
TATCGTTACA ACGTAGGGGT GCGCAATACC GCTAATTTTG CTAAAGATAA ATTGCACTTA
GATGTAAGTG GTAACTTTAT CCGCCAAGGT AGCCGTAATA TGATGGCGGG AGGTGGTTAT
TTCAACCCCT TAGTAGGTTT ATATTTAATG CCACGCAGTA TGGATTATCG CGATGTACAA
GCTTATGAAC GCTACAACCC TTCAAGAGGT ATTTATGAAA GATATCAACC TTATTCTGAT
AGAGTTGACA GTTACTTCTC CGAAAACCCT TATTGGGTAG CGAATCGAGA ACTCTTCTTG
AACAACAAGA AACGCTATAT GATGTCGGCT TCTTTGAAAT ACGATATCCT CGATTGGTTG
AACGTTACAG GGCGTGTGCG TTTAGATAAC GACTACGGTA CTGCTGAAGA AAAACTATAT
GCCAGCACTA CCAACTTCTT AATCGGTTGG AAAACTGAAT GGGGGCCTAA CAACAACGGT
TCTTATGCTA ATACCCAAAC TAAAGATGAG CAAACTTATG CCGATATAAT GTTTAACGTC
AATAAAAACT TTGGCGAAAA ATTCTCTTTA ACAGCTAACG TTGGTTCAAG TTATAACGAC
CGTTATAGCA CTGGTCTTTC AGCAAGAGGC GTGTTGTTCC GTTTGCCTAA CCTCTTCTCA
ACAACTAACT TCGACCCCCA ACGAGGAGGC TCAGGTCAGA GCTATTCTCG CGCTAAAAAC
GTAGCGGTAT TCGCAAGTGC CGAACTCGGC TATAAAGGTA TGTTATACCT CTCTGCTACA
GGTCGTAACG ACTGGTCTTC ACAACTGGTA AACTCTGCCG AACCTTCATT CTTCTATCCT
TCAGTAGGGC TTTCAGCTGT GATTTCTCAA ATGGCAAAAT TGCCTGAGTT TATCAACTAT
TTGAAAGTAC GCGGTTCATA TACTGAGGTA GGTTCTCCTA TCAGCAAAAC AGGTATTACT
CCAGGTACTA TTACTCACGA ACTTACTGCC GACGGCTTGA AAACTAATAA GGTATATCCT
TATCCAGAAT TTAAAGCTGA ACGCACTACT TCTTGGGAAG CTGGTTTAAA TACGAAATTG
TTCGGTAATA GCTTGTCAGT AGATTTGACT TTATACAAAT CTAACACTTA TAACCAATTC
TTTGAACAAC AATTGTCCGC TTCTTCTATC TACTCTTCTT TCTATTTGCA AGCAGGTAAC
GTTGAAAACC GCGGTATTGA GTTGTCAGTA AATTACAATA AAGAATTCCT TAACAAAGAA
CTCAACTGGA ATTCTACTCT TACCTATTCA CGCAATGTGA ACGAAATAAA AGAATTAGTT
CGCGGTTACC GCAATCCTTT CACAGGTGAA TTATTCGATA TTACCGAAGT GCGCAAAGGT
AGCACTGTAT TGCGCGAAGG CGGTAGTATG TCCGATGTTG TAGTAAGAGG TGTATTGCTC
CGCGATGTGA ACGGTGATCT TATCGAAGAA GCTTCTCAAT ACAAATTTGA TAAAACTCAA
GAAGTAAAAT TAGGACGTTC TACCCCCGAT TTCCAAATGG GGTGGCGCAA CACCCTTTCT
TATAAAGGTA TCGATTTGAG CTTTTTGTTC AACGGTAGCT TTGGAGGTAT CGTTTTAGCA
GGTACACAAC CTATGCTCGA TGCTTATGGA GTATCAAAAG CTTCTGCCGA TGCTCGTGAT
AACGATGGAG TAGTAGTGAA TGGTAAAAAA TACGACGCTC AAAAATACTA CAATACCATT
AAAGACCTTC CTGGTTATTA CTCTTACGAC GCTACTAACG TACGTCTCCA AGAAGTATCA
CTCAACTATA CTATAGATGG TAAACACTTC TGGGATAAAG TGAAAAGCGT AACGATTGGT
GCCATTGGTA CTAACCTTTG GATGATTTAC AACAAAGCTC CTTTCGACCC TCAACTTACT
TATGGTGTAG GTACCTATGC TACTACTGAG TTCTTTATGA CTCCAAGTGC AGCTACTTAC
GGTGCGAGCT TGAAAATTAA ATTCTAA
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| Protein sequence | MKVKISMLMF VFALFGGALM AQTKVTGTVT GSDGMPLPGV SVVIKGTTRG VSTDFDGKYE
LQAAANETIE YSFLGYSTLQ RKVTKASGTL TLDVVLQEEA QQLGEVVVTA LGIKRQEKAL
SYNVQQVKSE ELTKVKDVNV VNSLNGKVAG VNIQRSSSGV GGSTKVVMRG LKSLDGNNGV
LYVIDGVPLF NKQSDGGGNN FGRPGGGEGI SDINPEDIES INVLTGPSAA ALYGSEAANG
VILINTKKGK EGKTEVNLSS SVELMTPILL PEFQNTYGSN GDKSWGAKLA TPSTFEPRKF
FNTGTNFMNS VTFSTGNAQN QTFVSAAQTN AEGLIPNNAY YRYNVGVRNT ANFAKDKLHL
DVSGNFIRQG SRNMMAGGGY FNPLVGLYLM PRSMDYRDVQ AYERYNPSRG IYERYQPYSD
RVDSYFSENP YWVANRELFL NNKKRYMMSA SLKYDILDWL NVTGRVRLDN DYGTAEEKLY
ASTTNFLIGW KTEWGPNNNG SYANTQTKDE QTYADIMFNV NKNFGEKFSL TANVGSSYND
RYSTGLSARG VLFRLPNLFS TTNFDPQRGG SGQSYSRAKN VAVFASAELG YKGMLYLSAT
GRNDWSSQLV NSAEPSFFYP SVGLSAVISQ MAKLPEFINY LKVRGSYTEV GSPISKTGIT
PGTITHELTA DGLKTNKVYP YPEFKAERTT SWEAGLNTKL FGNSLSVDLT LYKSNTYNQF
FEQQLSASSI YSSFYLQAGN VENRGIELSV NYNKEFLNKE LNWNSTLTYS RNVNEIKELV
RGYRNPFTGE LFDITEVRKG STVLREGGSM SDVVVRGVLL RDVNGDLIEE ASQYKFDKTQ
EVKLGRSTPD FQMGWRNTLS YKGIDLSFLF NGSFGGIVLA GTQPMLDAYG VSKASADARD
NDGVVVNGKK YDAQKYYNTI KDLPGYYSYD ATNVRLQEVS LNYTIDGKHF WDKVKSVTIG
AIGTNLWMIY NKAPFDPQLT YGVGTYATTE FFMTPSAATY GASLKIKF
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