Gene Coch_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1377 
Symbol 
ID8367808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1616809 
End bp1617846 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content41% 
IMG OID644983804 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003141484 
Protein GI256820205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACT TTTTACTATC TTTTCTCCTT TTCTCCCTAT ATCCTGCTAC AGCGCAGGAA 
AACGACTCTA TTCCACAATC TCTATTGGAT AGCGTTACAA ACGCTTTACA AGGCTCACAC
CCATCTGAAG CAGATTTATC AGGTAAACAA TACAAAATCA ATGATAATCT AACCTATGTA
TACCAAAAAC CGCGTTTTGT AGATATCTTC AACAAAATAC CACGCAACAT AGGTAAATCG
GCAGTGGAGA TGGTGTCTAA ACCGAACTAT CCTTACGGAT TGGCAGCTAT TGGTGCTACG
GTAGCTCTTA TACCCGCTGA CCCTTGGCTC ATTAGAGAGA GTAGAAATTT GGGAGAGAAT
TTAGGACTAA ATGAAGCTCA TACCTATAAG AAGTTAGGCT TTTTGAAGAT TATTCCTGCC
GATGTAAACT CAGCAATGTA TTTTATTGGC AATGGTACGA CTTTTATCAT TATCAGTGGG
GGGATGGCTA CTTATGGTCT TATTACAGGT GATTATCGCG CCAAAAGTAC TGCTATGCAG
ATATTGGAAA GCATCATCGT ATCGGGGGCA TTTGTACAAC CTATCAAGCG ACTCACAGGG
CGCGAGAGTC CATTTATAAC CGCAGACGAC GGGCGTTGGC ACAGTCAGTG GACGTTTGCT
CCCAGCTTTA AAGCTTACCA AGAGGATACC CCTATGTATG ACGCTATGCC CTCTGGACAC
CTCACTACTG CAATGTCAGC ACTCACAGTG ATTGCCGAAA ACTACCCCGA CTACAAATGG
ATAAAGCCCG TAGGTTACAC AGCCTTAGGC TTGATGTGCT ACGAGATGAT GCAAAGTAAA
GTACACTGGG CTTCCGATTA CCCTATTGCC CTATTTGTGG GATATATCAC CGGTAAAACG
ATTGCTAACA GACGCATCAC CAAAATAAGA AAAGAAGAAA CTTTCTTAGT TAATAAAGTA
AAATATAGTT GGGAATTCTG TACCTCCAAC ACTTGGGAAG GATATCAGCT ACTTGGAGTA
AATATTAAAT TTAAGTAA
 
Protein sequence
MKYFLLSFLL FSLYPATAQE NDSIPQSLLD SVTNALQGSH PSEADLSGKQ YKINDNLTYV 
YQKPRFVDIF NKIPRNIGKS AVEMVSKPNY PYGLAAIGAT VALIPADPWL IRESRNLGEN
LGLNEAHTYK KLGFLKIIPA DVNSAMYFIG NGTTFIIISG GMATYGLITG DYRAKSTAMQ
ILESIIVSGA FVQPIKRLTG RESPFITADD GRWHSQWTFA PSFKAYQEDT PMYDAMPSGH
LTTAMSALTV IAENYPDYKW IKPVGYTALG LMCYEMMQSK VHWASDYPIA LFVGYITGKT
IANRRITKIR KEETFLVNKV KYSWEFCTSN TWEGYQLLGV NIKFK