Gene Coch_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1376 
Symbol 
ID8367807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1616362 
End bp1616802 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content42% 
IMG OID644983803 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003141483 
Protein GI256820204 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC AACAGCGAGA AAAGCAATTG CGTTATGACA AAGCTTATAT GTGTATGGCG 
ATGGAATGGG CAAAATTGTC TTATTCACAG CGCAAGCAAG TAGGAGCTAT AATAGTAAAA
GACCGTATGA TTATTTCAGA CGGTTATAAT GGTACGCCCA CTGGTTTTGA TAACTGTTGT
GAAGATGAGG AAGGCAATAC CCATTGGTAT GTACTTCACG CCGAAGCCAA TGCGATAATG
AAAGTTGCTT CGTCTACACA ATCGTCAGAA GGAGCGACGC TCTATATCAC AATGTCACCT
TGCAAAGAGT GCAGTAAGCT CATCTACCAA TCAGGGATTA AGCGCGTGGT GTATAAGGAA
GGCTATCGCG ACAACGAAGG GTTAGCTTTT CTCGAAAAAG CAGGCGTAGA AGTCGTTCAT
TTAGAAGATG TAAGTGAATA A
 
Protein sequence
MTKQQREKQL RYDKAYMCMA MEWAKLSYSQ RKQVGAIIVK DRMIISDGYN GTPTGFDNCC 
EDEEGNTHWY VLHAEANAIM KVASSTQSSE GATLYITMSP CKECSKLIYQ SGIKRVVYKE
GYRDNEGLAF LEKAGVEVVH LEDVSE