Gene Coch_1372 details

Gene Information

• Locus tag: Coch_1372
• ID: 8367803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1610588
• End bp: 1612429
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 644983799
• Product: glucosamine--fructose-6-phosphate aminotransferase
• Protein accession: YP_003141479
• Protein GI: 256820200
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.742215
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTGGAA TTGTAGGTTA TTTAGGCAAA CGCGCCGCCT TTCCCATCGT GATTGATGGT 
TTAAAACGCT TAGAGTATCG CGGATACGAC AGCGCAGGTT TTATCTTAAA CGCTGAGAGT 
TTTTACGGAG AAAAAACCAA GGGCAAAGTA TCCGATTTGG TAGCCAAGGC AGGAGAAAAT 
GTTCCTACTT ATGGCTGCGG TATGGGGCAT ACCCGTTGGG CTACCCACGG AGTGCCTAAC 
GACATCAATT CACACCCTCA CCGTTCTAAC TCTGGCAAAA TAGCCATTGT ACACAACGGA 
ATTATTGAGA ATTACGAGAG TATCAAGCAA AACCTCATCA AAGAGGGATT TGTATTCCAT 
TCAGATACTG ACACCGAAGT ATTAGTAAAC TTCATCGAAT ACTTCAAAGA AAAAGAAAAC 
GTCAATTTAG AGACTGCCGT GCGCTATGCG CTCAACGAGG TGGTTGGCGC TTTTGCCATT 
GCTGTAATGG AGGAAAGCAA ACCTGAGGAA ATAGTAGTAG CCCGCTTGGG TAGTCCATTG 
GTAATAGGGG TAGGTGATGG AGAGTTCTTC GTCGCTTCCG ATGCCTCTCC TTTTATAGAA 
TACACCCAAA ATGCTGTGTA TTTAGAAGAT GGCGAAATGG CTACCATTCA CCTCAACAAA 
CCGTTGAAAG TGATTAAAAT AGGCAGTAAC GAGCAGGTGA GTCCGTTTGT ACAACAACTC 
AAACTCAACC TCGAAGCAAT TGAAAAAGGC GGATACGACC ATTTTATGCT CAAAGAAATC 
TACGAGCAGC CTAAGTCTAT CCAAGACACG ATGCGCGGTC GCCTCTTGCC CAACCATACT 
ACCAAACTAT CAGGAATAGA TAATCATTTA GAGACCTTCC TCAATGCCAA ACGCATCGTT 
ATTGTAGCGT GTGGCACTTC GTGGCACGCA GGCTTGGTAG GTGAATATCT GTTAGAAGAA 
TACGCTCGTA TTCCTGTGGA GGTAGAGTAC GCCTCAGAGT TCCGCTATCG CAACCCTATT 
ATCAATAAAG GGGATATCGT CATTGCTATT TCGCAATCGG GTGAGACCGC CGATACCTTA 
GCAGCCCTCA AATTAGCGAA AGAAAAAGGA GCTTTTATCT ACGGTATTTG CAATGTGGTA 
GGTTCATCAA TTGCGCGTAT CACCCATTCA GGCACTTACA CTCACGCAGG TCCTGAAATA 
GGGGTAGCTT CTACCAAAGC CTTTACCACC CAGCTTACGG TGCTTACCCT TATCGCTTTG 
CATTTAGGAC ATAAGAAGGG TACCCTCAGT ACGGAAACCT ATCACCGTCT TTGCAAGGAA 
TTAGAACGTG TGCCCCAGTT GCTCGAAACC ACTATCAAAA CAGTCGATCA CAAGATAGCC 
GAAATAGCCG AAAGCTATAA AACAGCTACC AATTGCTTGT ATTTAGGTCG TGGTTTTAAC 
TTCCCTACCG CTTTGGAAGG GGCTTTAAAA CTCAAAGAAA TATCCTATAT TCACGCCGAA 
GGCTATCCAG CTGCCGAGAT GAAACACGGA CCTATCGCCC TTATCGATGA GAATATGCCG 
GTGATATTCA TCGCACCGTC TAAAGGACAT TATGATAAGG TAGTTTCCAA TGCACAAGAA 
ATAAAGGCAC GCAAAGGTAA AATTATAGCC GTAGTAACCG AAGGCGATAC CCAAATGGCG 
GGCTTAGCAA ACCACGTGAT TGAAATACCC GAAATCAGTG AGGCGCTTAC CCCTATTTTA 
GCCTCAGTAC CTTTGCAGTT GCTGTCCTAT TATATCGCTA TCAAGCGCGG TTGCAATGTC 
GATCAACCTC GTAATTTAGC CAAATCAGTA ACCGTAGAAT AA 

 

Protein sequence

MCGIVGYLGK RAAFPIVIDG LKRLEYRGYD SAGFILNAES FYGEKTKGKV SDLVAKAGEN 
VPTYGCGMGH TRWATHGVPN DINSHPHRSN SGKIAIVHNG IIENYESIKQ NLIKEGFVFH 
SDTDTEVLVN FIEYFKEKEN VNLETAVRYA LNEVVGAFAI AVMEESKPEE IVVARLGSPL 
VIGVGDGEFF VASDASPFIE YTQNAVYLED GEMATIHLNK PLKVIKIGSN EQVSPFVQQL 
KLNLEAIEKG GYDHFMLKEI YEQPKSIQDT MRGRLLPNHT TKLSGIDNHL ETFLNAKRIV 
IVACGTSWHA GLVGEYLLEE YARIPVEVEY ASEFRYRNPI INKGDIVIAI SQSGETADTL 
AALKLAKEKG AFIYGICNVV GSSIARITHS GTYTHAGPEI GVASTKAFTT QLTVLTLIAL 
HLGHKKGTLS TETYHRLCKE LERVPQLLET TIKTVDHKIA EIAESYKTAT NCLYLGRGFN 
FPTALEGALK LKEISYIHAE GYPAAEMKHG PIALIDENMP VIFIAPSKGH YDKVVSNAQE 
IKARKGKIIA VVTEGDTQMA GLANHVIEIP EISEALTPIL ASVPLQLLSY YIAIKRGCNV 
DQPRNLAKSV TVE