| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1365 |
|---|
| Symbol | |
|---|
| ID | 8367796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1603163 |
|---|
| End bp | 1605631 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644983792 |
|---|
| Product | Peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_003141472 |
|---|
| Protein GI | 256820193 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CACTTTTTAC TATTATTGCC CTGTTACTTT CGGGCTACAC TTTTGCACAG
ACGGATACTT CGGGGCGAAG CCTCTATCGT GCTACTCCTG AGAAGAAAAC TGCCTTAAAG
CACACGAAAT TGAAGGTAGA TTTTAACTTC ACTAACCAAA CACTCAACGG CGAAGAATGG
CTTACTGCTT CTCCTTATTT TTATGCTACC GATAGCCTTA TCCTCGATGC AAAGGCTATG
CTTATCCACA AGGTGGCTTT GGAACAGAAC GGCAAGCAAA AGTCTCTTTC TTATAGCTAT
AAGAACGATA TGTTGAGAAT AAAACTCAAC AAAACTTACC AAAAAGGGGA GACCTATACC
GTGTACATTC GCTATACGGC ACAGCCTGAA AAGGTAACTG ATAAGGGCAG TCGTGCGATT
ACCGATGCGA AAGGGCTTTA CTTTATCAAC CCTAACGGAG AAGCCGATAA GCCTATGCGC
CAAGTATGGA CGCAGGGTGA AACAGAAGGC TCTTCGTGCT GGTTTCCTAC CATCGACAAG
CCCAACCAAA AGACTACTCA AGAAATAGAA ATGACAGTGC CCGATAGCTT TGTTACCCTC
TCTAACGGGG TGCTAAAAAG CAGTGATAAG AAAGGCAATA TGCGCACCGA CTATTGGGTG
ATGGACAAGC CTCACGCACC TTATCTTTTC TTTATGGGGG CAGGAGAGTT TGCCGTAGTA
AAAGATACGC CTTGGCGCGG TAAGGTGCCT ATTGAATACT ATGTAGAAAA GGAATACGAG
CCTGTTGCAA AACAGATATT TGGAAATACT TCCGAGATGA TTACGTTCTT CTCTGAGCGT
TTTGGCTATG ACTATCCGTG GGCTAAATAC GCCCAAATGG TAGTGCGCGA CTTTGTGAGT
GGAGCAATGG AAAACACTAC GGCTGTAAGC CACGCCGAGA GTGCTTATCA GAGCGCAGAA
GCTTTGGCTG ACCAAAACTA TTGGGAGCCT ATTATCGCAC ACGAATTGGC ACACCACTGG
TTTGGTGATT TGGTAACTAC CGAAAGCTGG TCGAATCTCA CCGTAAACGA GTCGTTTGCT
AACTACAGCG AATACTTGTG GTTGCTACAC AAATACGGCA AAGATGCCGC AGAATACCAC
CTTAGCAATA ACACCCTTCA ATACCAACAC CGCGTCAATG ATTTTGCAAA AGATTTGGTG
CGCTTTGGCT ATGATTCACG TGAGGATATG TTCGATTTGG TATCTTACAA CAAAGGCGGG
GCTATCTTGC ATATGTTGCG CAATTATCTT GGTGATGAGG CTTTCTTTGC AGGGCTTACC
GATTACCTCA AAACAAATGA ATACGGCACG GGGGAAGCTC ACCAATTACG TCTTTCGTTA
GAAAAAGTGA GCGGTAAAGA CTTGAACTGG TTCTTCAACC AATGGTACTT TGGCAATGGT
AACCCTACTG TGAATGTAGA AAAGACGTTT AGTAATGGTA AATTGACCTT AAAAATCATT
CAAACACAAA GCGAAGACCT CTTGTTTCAG TTTCCGTTGG ATATAGATAT TTACAGAAAT
GGCAAGGCAG AGCGTTATAG TGTTTGGGTA GATGCTCGTA AAGAAAATAC TTTTACTTTC
GCAATGAAGA AAGCCCCAGA GTTGATAGAT ATCAACCCCG AAGGTGTGGT GCTGATAGAT
GAGCAATACC AAAAAACGTG GGCAGAGTAT TTGTACCAAA TGCAACGCGC TAAATCGCTC
AAGAGCAGAA TGCAAGCGGT AAGTGCCCCA ATGGCTCCTG ACGGCAAAGA TATTTTGCTC
GCTGCTCTTA AAGACCCCTT TTTCCAAGTG CGTATACAAG CATTACAAAA ACTCGCTAAT
TATGAACTCA ATGCCAAAGA AATGGCAATG GTAGAAAAGA TTGCGTCTTC TGACCCTAAG
AACTTAGCTA AATCGGCAGC GATATGGGTA TTAGCTACCT CAAAAGACAA AAACAAATAC
GTTTCTTTAT TTGAAAAATA CCTTGAAACT CCTTCGGGGG CTATTAAGAA TGCTGCTATT
AACGGGATAG CTCGTACTGA GCCCGCCCGC GCTAAGAGTA TACTTGAAAA AGGAAGTATT
AAAGACTTTG ATACCGACCA ATTAGCGGGA TTATCAGGAG TAATTGTAGA CAACCAAATG
GAGCAGTATC TCCCTGCGAT ACTTCCTTAT TTTATATACT ATCCTTTCTT TGAAAAGGAC
AATCCTGAAA CAGCTGTCAA CTTCAAGAAA GGCTATGAGT GGGCAATGCA CTTAGACAAT
ACTTCACACG TGGAGCTATT GGCTGAATCA CTCAAAGAAA TCGCTAAAGA TATGGAGAAC
CCTGCTGCTA AAGAGATGCT CAAAAACGTA TTGGATGAAG GTATTACTAT CAAACGCGGC
TTAAACCAAA CTGAATCGGT AAAGAAACAG ATTAAGATGT TGGAAGAGAT TAAAGAAATG
TTTAAGTAG
|
|---|
| Protein sequence | MKKTLFTIIA LLLSGYTFAQ TDTSGRSLYR ATPEKKTALK HTKLKVDFNF TNQTLNGEEW
LTASPYFYAT DSLILDAKAM LIHKVALEQN GKQKSLSYSY KNDMLRIKLN KTYQKGETYT
VYIRYTAQPE KVTDKGSRAI TDAKGLYFIN PNGEADKPMR QVWTQGETEG SSCWFPTIDK
PNQKTTQEIE MTVPDSFVTL SNGVLKSSDK KGNMRTDYWV MDKPHAPYLF FMGAGEFAVV
KDTPWRGKVP IEYYVEKEYE PVAKQIFGNT SEMITFFSER FGYDYPWAKY AQMVVRDFVS
GAMENTTAVS HAESAYQSAE ALADQNYWEP IIAHELAHHW FGDLVTTESW SNLTVNESFA
NYSEYLWLLH KYGKDAAEYH LSNNTLQYQH RVNDFAKDLV RFGYDSREDM FDLVSYNKGG
AILHMLRNYL GDEAFFAGLT DYLKTNEYGT GEAHQLRLSL EKVSGKDLNW FFNQWYFGNG
NPTVNVEKTF SNGKLTLKII QTQSEDLLFQ FPLDIDIYRN GKAERYSVWV DARKENTFTF
AMKKAPELID INPEGVVLID EQYQKTWAEY LYQMQRAKSL KSRMQAVSAP MAPDGKDILL
AALKDPFFQV RIQALQKLAN YELNAKEMAM VEKIASSDPK NLAKSAAIWV LATSKDKNKY
VSLFEKYLET PSGAIKNAAI NGIARTEPAR AKSILEKGSI KDFDTDQLAG LSGVIVDNQM
EQYLPAILPY FIYYPFFEKD NPETAVNFKK GYEWAMHLDN TSHVELLAES LKEIAKDMEN
PAAKEMLKNV LDEGITIKRG LNQTESVKKQ IKMLEEIKEM FK
|
|---|
| |