Gene Coch_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1355 
Symbol 
ID8367786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1594139 
End bp1594795 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID644983782 
Producthypothetical protein 
Protein accessionYP_003141462 
Protein GI256820183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.231212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATGG CATCGGCACA GCAACACGAA ATCGGTGTTT TCTTAGGTGG AAGCAACCCC 
ATTTCAGATG TTGGTAGAAC CTATTATTTA TATCCTAACA AAATCGCTTT TGGTGGGATA 
TATAAATGGA ATTTCCACGA ACGTATGGCA GTTCGTGTGC AGGTTACTAA GTCCGAACTT 
AGAGCTAACG ACGTCCAGTC CGATATCCCT GGTAAACGCA ACCGAGGGTT CGCTTATTCA 
AGTGATATTA CCGATTTGGC AGTAGGCACC GAGTTCAATT TCTTTAGCTA CAGAATCGGC 
AATTTGCTCG ATATGCCTAT GACCCCCTAT GTGTTCGTAG GTATAGCTGG GCTTTGGCAC 
GACGATTTGT ACTTCGACCC CTCCTCTCCC AAACCCGTTG AAGCTACCGA TACTACACGT 
CGCGACTTCG ATGTGGCTGT GCCCGTAGCT TTCGGTTTTA AAGCTAAAAT CACTCGAAGG 
CTTGTTTTAG GAGGTGAAGT AGCTTTCCGT TTTGCCCTTA CTAACAACGT CGATGGTAGT 
GCGCCCGAAA GAAAATCCTT TACATTCGGT AACATAGGAA GAAGTTACGA CTGGTACGCC 
TTCTCAGGTC TTACCCTTAC CTACACCTTC GGCGAATGGC CTTGCTATTG TAGATAA
 
Protein sequence
MHMASAQQHE IGVFLGGSNP ISDVGRTYYL YPNKIAFGGI YKWNFHERMA VRVQVTKSEL 
RANDVQSDIP GKRNRGFAYS SDITDLAVGT EFNFFSYRIG NLLDMPMTPY VFVGIAGLWH 
DDLYFDPSSP KPVEATDTTR RDFDVAVPVA FGFKAKITRR LVLGGEVAFR FALTNNVDGS 
APERKSFTFG NIGRSYDWYA FSGLTLTYTF GEWPCYCR