Gene Coch_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1353 
Symbol 
ID8367784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1590268 
End bp1592187 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content39% 
IMG OID644983780 
Productsulfatase 
Protein accessionYP_003141460 
Protein GI256820181 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCA GAGAATATGT AGTTTTCTTA TACCGTATCT TCTTGGTATA CTTATTTTAT 
GCCATTGCAC GTGGTTTGTT TATCTATATG AATCGCGGAC TGATGGGTGA TTATAACACA
TCCGACCTTT TCTATTATGG ATTGGCGTTT GATAACTGTG CTATAATGTA CACTAATTTG
CTGTTCATAC TGCTCAGTTT ACTACCTTTG TGGGTAAATA CCCATAGGAA ATTTCAGAAA
GTAGTTTTTT GGTCGTACTT TATACCTAAT ACGATTGCTT ATGCCACCAA TTTTATTGAT
ATGGCATACT ACCCTTTTAG CAAGTCTCGC CTTACTTCGG CATCGTTTGC AGTTATAGAA
CACGAAAACA ACAAAATGAA AATATTCAGT AGCTTTTTAG GAGGCTATTG GTATATGTTT
GTAGGCTTCT TTTTACTGAT AGCTCTTTGG GTTTTCCTTT ATAAACGCGT GAAAAACGTC
GAAGTGCCTA TTGCTCAAAA GAAATCTTAT TTTGGTTGGT CTGCTGTATT TTTCTTAGGC
TTCGGTACTC TGATAATGAT GGCTATACGA GGCGGTGGTT TTACTTCGGA TACACGCCCT
ATCAATATGC TCGATGCTAG CCGACACGTA AATACAGCTC CTCAGGCTGA TGCGATACTA
AACACGCCTT TTTGTCTCAT TCGCAGTATG GGTAAGAACA AAGGATTTAA AGAATATCAC
TTTGTAGATG AAGCCTACAT CAATGAGAGT TTAAAACCTA TTAAGCAGTA TAACCGCGAA
GTAGCTACCA AGCCTAATGT CGTCCTCTTT ATTTTAGAAA GTTTCGGCAA AGAGTATTGG
GGCTGTATGA ATACTAAAAC CCATATTCCT GACTTTAAGT CGTATACACC CTTCTTAGAC
TCGTTAGCAC AACATTCACT TGTGCTCGAC AATGCTTATT GTACAGGACG TCAGTCTATA
CACGGAATGT CGTCAATGTT GGCAGGAATT CCCTCTTTTC AAGTCGCTTA CACCTCATCA
CCTTATGTGA AACAACCCAC ACAATCTTTG GTGTCTATCG CCAAAGAAAT GGGCTACGAT
ACCTCTTTCT TCCATTCAGC ACCCAATGGT TCTATGGGAT TCTTAGGTTT TTCTAATATC
TTAGGTTTCG ACCATTACTA TGGTAAGAAT GAGTACAATA ACGATGCTGA TGACGATGGA
CACTGGGGAA TTTGGGACGA ACCTTTTTTC CAATATATGT GCAGAACTTA TTCTCAAAAG
AAACAACCTT TCTTAGGCAC TATTTTCACA CTCTCCTCCC ACCACCCTTT TCAAATTCCT
AAGCAATATG AGGGCAAATT CCCTAAAGGC AACTTAGAAA TTCACCAATG TATTGGCTAT
ACCGATTACG CTCTCAAACA ATTCTTTGAG TGTGCTAAAA AACAACCTTG GTATAACAAT
ACTATCTTTG CTTTTGTCAA TGACCACCCT AACCAAATCT ATTACGACCT TTACAAAGAG
CCTATTACAG GCAAAGGAGC GGCAATTATG TTCTACAGCC CTAACTCTAA TTTGGTGCCA
AAGGGTGTAA ATTCAGATAT TACTCAGCAA ATAGATATTT ATCCTTCGTT AGTAGACCTA
ATGGGTTACC ATAAGCCTTT CCGCTCTTGG GGGCGCAGTG TGTTTGCCAA TCTTCCTGAT
GAAACGCCTC GCGCTTTTAT CTCCGATGCG CTTATGTACC AAATGATGCA AGGTAATTAC
ATCTATATCA TCGACGAAAC AGGCAAGGTA AACGGAGTGT ACAAGAAAGA AGACGGTGCT
CTCAAAAACA ATCTCTTGGG CAAAGAAGAC AATGCCGAAA TACAAAAAGG TATTAAAGAT
TTAAAAGCCT TTATGCAAGA CTATATGGAT AGAATTATCA ACCATAAATT GAATAATTAG
 
Protein sequence
MRIREYVVFL YRIFLVYLFY AIARGLFIYM NRGLMGDYNT SDLFYYGLAF DNCAIMYTNL 
LFILLSLLPL WVNTHRKFQK VVFWSYFIPN TIAYATNFID MAYYPFSKSR LTSASFAVIE
HENNKMKIFS SFLGGYWYMF VGFFLLIALW VFLYKRVKNV EVPIAQKKSY FGWSAVFFLG
FGTLIMMAIR GGGFTSDTRP INMLDASRHV NTAPQADAIL NTPFCLIRSM GKNKGFKEYH
FVDEAYINES LKPIKQYNRE VATKPNVVLF ILESFGKEYW GCMNTKTHIP DFKSYTPFLD
SLAQHSLVLD NAYCTGRQSI HGMSSMLAGI PSFQVAYTSS PYVKQPTQSL VSIAKEMGYD
TSFFHSAPNG SMGFLGFSNI LGFDHYYGKN EYNNDADDDG HWGIWDEPFF QYMCRTYSQK
KQPFLGTIFT LSSHHPFQIP KQYEGKFPKG NLEIHQCIGY TDYALKQFFE CAKKQPWYNN
TIFAFVNDHP NQIYYDLYKE PITGKGAAIM FYSPNSNLVP KGVNSDITQQ IDIYPSLVDL
MGYHKPFRSW GRSVFANLPD ETPRAFISDA LMYQMMQGNY IYIIDETGKV NGVYKKEDGA
LKNNLLGKED NAEIQKGIKD LKAFMQDYMD RIINHKLNN