Gene Coch_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1341 
Symbol 
ID8367772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1574704 
End bp1575387 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content36% 
IMG OID644983768 
Productprotein of unknown function DUF541 
Protein accessionYP_003141448 
Protein GI256820169 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT ACATTTTATT ATTCTCATTG GTCTCTACAA TGGCAATAGC ACAAACCCAA 
ACACCTTCAG TGCAAGTGGT GGGTGAAGGC ATTGTATATG TTATCCCCGA TGTCGTAAAC 
ATCTCTATCA GTATAGAAAG AGAAGGACTT GACCTTAAAA ATTTGCGACA AAAAAACAGT 
GAAGAAGTAG CCAAGGTCTT GGAGACTTTG AGTAAAGAAC TGCCAAAGGA AAACTTCCAA 
ACCAGCTATG TTTCACTTTA TAAAGACGAT TATAACAAGA TTAATAAATA TCGCGTTTTA 
CAAAATATTA CTATTAAATT AGAAGATATT AGCAAATACG ATAGTTTAAT GAACGCTATT 
TTTGATGCAG GCGTAAACCG TATCAACAGT GTAAGTTTCG ATGTGAAGAA TAAAGAAAAG 
CATTTGCAAG ACGCTCGTGT AGCTGCCATT GAAGATGCTC GTAAAAAAGC ACTGCTCTAT 
GCAGTAAGTT TAGACCAAAA TATAGGCAAA GCCATTGCTG TTAAAGAACT CTCATCAAAC 
TTTAACGATG TACAACCTAC TTTCAGATCC AGTAAAGTGA GCTTAGGTAG TAGCGGAGCG 
GAAGCTAACG ACGACACCTT AGCAATAGGC AAAATAGCGG TAGAAGCACA AATAAATGTA 
GCTTTTGAAT TACTCAATAA ATAG
 
Protein sequence
MKQYILLFSL VSTMAIAQTQ TPSVQVVGEG IVYVIPDVVN ISISIEREGL DLKNLRQKNS 
EEVAKVLETL SKELPKENFQ TSYVSLYKDD YNKINKYRVL QNITIKLEDI SKYDSLMNAI 
FDAGVNRINS VSFDVKNKEK HLQDARVAAI EDARKKALLY AVSLDQNIGK AIAVKELSSN 
FNDVQPTFRS SKVSLGSSGA EANDDTLAIG KIAVEAQINV AFELLNK