| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1339 |
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| Symbol | |
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| ID | 8367770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1570216 |
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| End bp | 1572972 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983766 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003141446 |
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| Protein GI | 256820167 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA AAGAGATACT TATAAAGGGT GCTAAATTAC ACAACCTTAA AAATATAACT
GTAGGGATTC CTCGTAATAA GTTAGTGGTG ATTACAGGAC TTTCGGGCTC GGGTAAATCA
TCATTGGCGT TTGACACGCT TTACGCCGAA GGACAGCGCC GTTATGTGGA GAGCCTATCG
TCGTACGCGC GTCAGTTTTT GGGTAAGTTA GACAAACCCA AAGTAGACAA TATCGTAGGG
ATTGCCCCTG CGATTGCGAT TCAACAGAAA GTAAATACCT CGAACCCACG TTCTACTGTG
GGCACTTCTA CCGAGGTGTA CGACTACTTG AAGCTGCTTT TTGCTCGTAT CGGGAAGACG
TATTCGCCAA TTTCGGGACA AGAGGTGAAA AAACATACGG TTACCGATGT GGTAGATGCA
GTAATGCGAT ATCCCAAAGG TACGAAATTG TTGCTTTTAG CCCCTGTGAG TATCCCCAAA
GACCGCACCG TAGAGCAAGT GCTCAAACTC CTATTACAAC AGGGCTATGC ACGCATTCTA
TACAAAGAAG AAATTATCCT TATTGAGGAA GACAACTTAC CTAAGAATCT CGACAATTTC
CAATTGGTAG TAGATAGGGT GATTGTGCGT CACGACGAAG ACTTTCAGCA CCGCCTTGCC
GATGCGGTAG AGACGGCTTT TTTTGAAGGC AAAGGCGAGT GCTATATTCA AGAAATGGAC
GGGGTGGTAC AAACGCATTT CAGCAATCGG TTTGAGTTGG ACGGTATCAC TTTTTTAGAG
CCTAACGTAC ATTTGTTCAG CTTTAACAAC CCTTATGGGG CTTGCCCAAA ATGCGATGGT
TATGGTGATA CTATCGGACT TGATGAAGAC CTTATCGTAC CTAACACAGG TCTTTCGGTC
TACGAGAATG CTATCTATCC TTGGCGTGGC GAGACGATGA GTTGGTTTCG TGACCAATTG
GTGAATAACG CCTATAAGTT CGATTTCCCG ATACACAAGC CTTGGTTTGA GCTCACCAAT
GAGCAGAAAC AATTGGTTTG GGACGGTAAC AAGTATTTCA CAGGACTCAC CGATTTTTTC
AAAGAGTTAG AAGACAAAAG TTACAAAATA CAAAACCGAG TGCTCTTGGC ACGCTATCGC
GGAAAAACGC GTTGTCACGA ATGCCACGGC AAGCGTTTGC GCAAAGAGGC TAACTACGTA
AAAATAGCAG GCAAAAGCAT TTCGGACTTG GTAGAATTGC CTATTGAAGA ACTACAAATC
TTTTTCAAAG AACTCAAGCT CACCGACTAT GAGCAAGAGG TAGCCAAACG ATTGCTTTTA
GAAATTAACA ACCGCTTGCA ATTCCTTGCC GATGTAGGCT TAGGTTACTT AACGCTCAAC
CGAAAATCGA ACACGCTCTC AGGAGGGGAA AGCCAGCGCA TTAACTTAGC GACCTCGTTG
GGCAGTAGTT TGGTAGGCTC TATGTACATA CTCGATGAGC CCAGTATCGG TTTGCACCCA
CGCGATACCG AACGACTGAT AAGCGTACTA AAATCCCTGC GCGACTTAGG CAATACGGTG
ATTGTGGTGG AGCACGACGA GGATATTATG AAAGCTGCCG ACCATATTAT TGATATAGGT
CCTGAAGCCG GTACGCACGG TGGCGAAGTA GTAGCGACAG GCACTTACAA CGAACTTCTA
AAAGCCAACA CCCTTACGGG GAAATACCTC AGTGGGCGCT TAACAATTGA AGTACCCAAA
AAGCGACGCA CTTCGCCTCA CTACATCACT TTGGTAGGCT GTCGCGAGAA CAACCTTAAA
AATATAGATG TTACTTTTCC TTTGGATATG CTCACGGTAG TTACAGGGGT ATCGGGTAGT
GGAAAATCGA CTTTGGTGAA AAAGCTACTC TATCCTGCTA TTCAGAAAGA ATTAGACTTA
GGCGGAGAGA AAATCGGTCA GTTTACCAAA ATAGAGGGCA AATACAAGCA CTTGCAAAGT
GTGGAGTTTG TAGACCAAAA CCCTATTGGC AAATCTACCC GTTCAAATCC TATTACCTAT
ATTAAGACTT ACGACGATAT TCGCGCCCTC TTTGCAAGTC AGAAGTTGGC AAAGATGCGC
AATTTCCAAT CCAAACACTT CTCGTTCAAC GTTGATGGGG GGCGTTGTGA AGTATGTAAA
GGAGAGGGTG AAGTAACCAT AGAAATGCAA TTTATGGCTG ATGTGCACCT CACTTGTGAG
GCTTGTGGCG GCAAACGCTT CAAAAAAGAA GTGCTTGAAG TGATGTACGA AGGCAAAAAC
ATAGATGACC TGCTGAACAC TACTATTGAT GATGCCGTAG CCTTTTTCCA AAAGCACAAA
CAAACCAAAA TAGCCGAAAA ACTCAAACCT TTGCAAGATG TAGGTTTGGG GTATGTAACA
CTGGGGCAAT CCTCTTCTAC CCTATCGGGT GGGGAAGCCC AACGGATAAA ATTAGCGTCG
TTTCTATCGA AATCAGACAG TAAAGAAAAG GTGCTTTTCA TCTTCGATGA GCCTACTACG
GGGTTGCACT TTCACGACAT TCGAAAGCTC TTAGACTCGC TACAAGCTCT TATAGAAAAA
GGGCATTCGG TAATTATTAT AGAGCACAAT GTAGAGATGA TAAAATCGGC TGACTACGTG
ATAGATTTAG GCTTAGAAGG CGGTGCTAAG GGAGGTAATC TCATAGCAAC GGGTACGCCC
GAAGAAATCG CTAAAAACAA AAAGAGCTAC ACAGGTAAAT ACTTAAAACT GAAATAA
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| Protein sequence | MKTKEILIKG AKLHNLKNIT VGIPRNKLVV ITGLSGSGKS SLAFDTLYAE GQRRYVESLS
SYARQFLGKL DKPKVDNIVG IAPAIAIQQK VNTSNPRSTV GTSTEVYDYL KLLFARIGKT
YSPISGQEVK KHTVTDVVDA VMRYPKGTKL LLLAPVSIPK DRTVEQVLKL LLQQGYARIL
YKEEIILIEE DNLPKNLDNF QLVVDRVIVR HDEDFQHRLA DAVETAFFEG KGECYIQEMD
GVVQTHFSNR FELDGITFLE PNVHLFSFNN PYGACPKCDG YGDTIGLDED LIVPNTGLSV
YENAIYPWRG ETMSWFRDQL VNNAYKFDFP IHKPWFELTN EQKQLVWDGN KYFTGLTDFF
KELEDKSYKI QNRVLLARYR GKTRCHECHG KRLRKEANYV KIAGKSISDL VELPIEELQI
FFKELKLTDY EQEVAKRLLL EINNRLQFLA DVGLGYLTLN RKSNTLSGGE SQRINLATSL
GSSLVGSMYI LDEPSIGLHP RDTERLISVL KSLRDLGNTV IVVEHDEDIM KAADHIIDIG
PEAGTHGGEV VATGTYNELL KANTLTGKYL SGRLTIEVPK KRRTSPHYIT LVGCRENNLK
NIDVTFPLDM LTVVTGVSGS GKSTLVKKLL YPAIQKELDL GGEKIGQFTK IEGKYKHLQS
VEFVDQNPIG KSTRSNPITY IKTYDDIRAL FASQKLAKMR NFQSKHFSFN VDGGRCEVCK
GEGEVTIEMQ FMADVHLTCE ACGGKRFKKE VLEVMYEGKN IDDLLNTTID DAVAFFQKHK
QTKIAEKLKP LQDVGLGYVT LGQSSSTLSG GEAQRIKLAS FLSKSDSKEK VLFIFDEPTT
GLHFHDIRKL LDSLQALIEK GHSVIIIEHN VEMIKSADYV IDLGLEGGAK GGNLIATGTP
EEIAKNKKSY TGKYLKLK
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