Gene Coch_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1324 
Symbolpgk 
ID8367755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1536981 
End bp1538171 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content41% 
IMG OID644983751 
Productphosphoglycerate kinase 
Protein accessionYP_003141431 
Protein GI256820152 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0186876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TAGACAATTT TAATTTTGCG GGCAAGAAAG CCCTTATTCG CGTGGACTTT 
AATGTGCCAT TGGACGAAAA TTTTAAAGTA ACTGATAACA CTCGTATTGA GGCTGCGAAA
CCTACTATCG AAAAAATTCT CAAAGATGGA GGAACTGCAG TACTTATGAG CCACTTAGGT
CGCCCTAAAG GGGAACGCAA CGATAAGTAT TCTTTGCGTC ACATCGTAAG TGAAGTGGAA
AAAGTATTAG GTAAAAAAGT GATTTTTGTA GATGATTGCG TAGGCGAAGT AGCCGAAAAA
GCGGTAGCAG CTGCTCCTGC TGGTAGTGTG GTATTACTTG AAAACTTGCG TTTTCATAAG
GAAGAAGAAA AAGGAGATGA AGCATTCTCT AAACAGCTTG CTAAACTCGG AGATATTTAC
GTGAACGATG CTTTTGGTAC CGCTCACCGC GCTCACGCTT CGACTACTAT TGTAGCGAAA
TTCTTCCCTA ACCAGAAATG CTTTGGATAC CTTCTTGCTA AAGAAATTGA AAGTATCGAA
AAAGTGATGA AAACCGGCGA AAAACCTGTA ACTGCTATCC TTGGTGGTTC TAAGGTTTCT
TCTAAAATCA CTATTATCGA AAATATCTTA GATAAAGTGA ACCACCTTAT CATAGGTGGG
GGTATGGCTT ATACTTTCAT CAAAGCACAA GGCGGAAAAG TAGGTAGTTC TATCTGCGAA
GACGATAAAC TTGACCTTGC ACTTGATATC CTTGCCAAAG CCAAAGCTAA AGGAGTAGAA
GTACACTTGC CTATAGACGT AGTAGCTGCT GACGCTTTTG ATAACAACGC CAAAACACAA
GTAGTACCTG TAAATGCTAT TCCCGATGGT TGGGAAGGAT TGGACGCAGG ACCTAAGACT
CTTGAAAACA TCAAATCGGT ATTGCTTAAA TCAAAAACTA TTTTGTGGAA TGGTCCTATC
GGAGTATTTG AAATGCCTAA CTTCGCTAAA GGTACCATTG CCGTAGGTGA TTACGTGGCT
GAAGCTACTA AAAAAGGTGC TTTCTCACTC GTAGGAGGTG GCGACTCAGT AGCTGCTGTA
AAACAATTTG GTTTTGAGCA TAAAGTAAGT TATGTTTCTA CCGGTGGTGG AGCGATGCTT
GAAAGCCTTG AAGGATTGGT ACTTCCTGGT ATTGCAGCTA TTAACGAATA G
 
Protein sequence
MKTIDNFNFA GKKALIRVDF NVPLDENFKV TDNTRIEAAK PTIEKILKDG GTAVLMSHLG 
RPKGERNDKY SLRHIVSEVE KVLGKKVIFV DDCVGEVAEK AVAAAPAGSV VLLENLRFHK
EEEKGDEAFS KQLAKLGDIY VNDAFGTAHR AHASTTIVAK FFPNQKCFGY LLAKEIESIE
KVMKTGEKPV TAILGGSKVS SKITIIENIL DKVNHLIIGG GMAYTFIKAQ GGKVGSSICE
DDKLDLALDI LAKAKAKGVE VHLPIDVVAA DAFDNNAKTQ VVPVNAIPDG WEGLDAGPKT
LENIKSVLLK SKTILWNGPI GVFEMPNFAK GTIAVGDYVA EATKKGAFSL VGGGDSVAAV
KQFGFEHKVS YVSTGGGAML ESLEGLVLPG IAAINE