Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1324 |
Symbol | pgk |
ID | 8367755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1536981 |
End bp | 1538171 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644983751 |
Product | phosphoglycerate kinase |
Protein accession | YP_003141431 |
Protein GI | 256820152 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0186876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA TAGACAATTT TAATTTTGCG GGCAAGAAAG CCCTTATTCG CGTGGACTTT AATGTGCCAT TGGACGAAAA TTTTAAAGTA ACTGATAACA CTCGTATTGA GGCTGCGAAA CCTACTATCG AAAAAATTCT CAAAGATGGA GGAACTGCAG TACTTATGAG CCACTTAGGT CGCCCTAAAG GGGAACGCAA CGATAAGTAT TCTTTGCGTC ACATCGTAAG TGAAGTGGAA AAAGTATTAG GTAAAAAAGT GATTTTTGTA GATGATTGCG TAGGCGAAGT AGCCGAAAAA GCGGTAGCAG CTGCTCCTGC TGGTAGTGTG GTATTACTTG AAAACTTGCG TTTTCATAAG GAAGAAGAAA AAGGAGATGA AGCATTCTCT AAACAGCTTG CTAAACTCGG AGATATTTAC GTGAACGATG CTTTTGGTAC CGCTCACCGC GCTCACGCTT CGACTACTAT TGTAGCGAAA TTCTTCCCTA ACCAGAAATG CTTTGGATAC CTTCTTGCTA AAGAAATTGA AAGTATCGAA AAAGTGATGA AAACCGGCGA AAAACCTGTA ACTGCTATCC TTGGTGGTTC TAAGGTTTCT TCTAAAATCA CTATTATCGA AAATATCTTA GATAAAGTGA ACCACCTTAT CATAGGTGGG GGTATGGCTT ATACTTTCAT CAAAGCACAA GGCGGAAAAG TAGGTAGTTC TATCTGCGAA GACGATAAAC TTGACCTTGC ACTTGATATC CTTGCCAAAG CCAAAGCTAA AGGAGTAGAA GTACACTTGC CTATAGACGT AGTAGCTGCT GACGCTTTTG ATAACAACGC CAAAACACAA GTAGTACCTG TAAATGCTAT TCCCGATGGT TGGGAAGGAT TGGACGCAGG ACCTAAGACT CTTGAAAACA TCAAATCGGT ATTGCTTAAA TCAAAAACTA TTTTGTGGAA TGGTCCTATC GGAGTATTTG AAATGCCTAA CTTCGCTAAA GGTACCATTG CCGTAGGTGA TTACGTGGCT GAAGCTACTA AAAAAGGTGC TTTCTCACTC GTAGGAGGTG GCGACTCAGT AGCTGCTGTA AAACAATTTG GTTTTGAGCA TAAAGTAAGT TATGTTTCTA CCGGTGGTGG AGCGATGCTT GAAAGCCTTG AAGGATTGGT ACTTCCTGGT ATTGCAGCTA TTAACGAATA G
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Protein sequence | MKTIDNFNFA GKKALIRVDF NVPLDENFKV TDNTRIEAAK PTIEKILKDG GTAVLMSHLG RPKGERNDKY SLRHIVSEVE KVLGKKVIFV DDCVGEVAEK AVAAAPAGSV VLLENLRFHK EEEKGDEAFS KQLAKLGDIY VNDAFGTAHR AHASTTIVAK FFPNQKCFGY LLAKEIESIE KVMKTGEKPV TAILGGSKVS SKITIIENIL DKVNHLIIGG GMAYTFIKAQ GGKVGSSICE DDKLDLALDI LAKAKAKGVE VHLPIDVVAA DAFDNNAKTQ VVPVNAIPDG WEGLDAGPKT LENIKSVLLK SKTILWNGPI GVFEMPNFAK GTIAVGDYVA EATKKGAFSL VGGGDSVAAV KQFGFEHKVS YVSTGGGAML ESLEGLVLPG IAAINE
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