Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1309 |
Symbol | |
ID | 8367740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1522585 |
End bp | 1523466 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644983736 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003141416 |
Protein GI | 256820137 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAT CAGAAAAAAT ATTATTAGCC GGAGCGACCG GTTATTTAGG TCAGTTTATA TTAGCTGAAC TCTTGAAAAA AGAATACTCT ACCCGCATTG TGGTGCGTAA TAAGTCGAAA ATAGCACCCG CCTTACTTAC CCACCCGCTA TTAGAAGTAG TCGAGGCTGA GGTAACAAAA CCCAATACTT TACTCGGTGT GTGCGAGGGG GTTACCCAAG TGATTTCCAC TGTCGGAATT ACTCGGCAGA AAGACAAACT CACCTACGAG CAAGTAGATT ATGCGGCTAA CAAGAACTTG CTTGATGAAG CACTGCGCTC AGGGGTACGT AAGTTTGTAT ATATTTCCGT ATTAAACGGC GAAGCATTAC GTTCTATTGC CATTGGGGCT GCCAAAGAGC ATTTTGTAGA TACCCTTAAA ACCAGTGGAA TGGACTACTG TATCGTGCGT CCATCGGCTT TTTACAGCGA TATAGCTACC TTCTTTTCAA TGGCAAAAGA AGGTAAAGTG CGTCTGTTTG GCAAAGGGCA ATACGCTATG AATCCTATTC ACGGCGAGGA TTTAGCCGAG GTGTGTGTAG CGCAATTAGA GAGCTCCGAA AAGGAAGTGA ATGTAGGAGG GGCTGAGGTG TTCACCCAGT ATGAAATCGC TGCTTTGGCT TTCGAGGTGT TACATAAGCC TGTGAAGGTT GGTTTTTTGC CTGATTGGGT ACGGAAGTCC GTTTTGAAAA TAGGCAAATA TCTCTTGCCT AAAAGTGCTT ACGGCACTAT AGAATTCGTT TTCACCGTAA TGGCAATGGA TTCGGTAGCG CCAATGAAGG TAGGAAAACA TAGGTTGAAG GTATTTTTTG AGGAACTTCG AAATAAATAT TTGCATTTGT AG
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Protein sequence | MKSSEKILLA GATGYLGQFI LAELLKKEYS TRIVVRNKSK IAPALLTHPL LEVVEAEVTK PNTLLGVCEG VTQVISTVGI TRQKDKLTYE QVDYAANKNL LDEALRSGVR KFVYISVLNG EALRSIAIGA AKEHFVDTLK TSGMDYCIVR PSAFYSDIAT FFSMAKEGKV RLFGKGQYAM NPIHGEDLAE VCVAQLESSE KEVNVGGAEV FTQYEIAALA FEVLHKPVKV GFLPDWVRKS VLKIGKYLLP KSAYGTIEFV FTVMAMDSVA PMKVGKHRLK VFFEELRNKY LHL
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