| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1308 |
|---|
| Symbol | |
|---|
| ID | 8367739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1521339 |
|---|
| End bp | 1522142 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644983735 |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_003141415 |
|---|
| Protein GI | 256820136 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATAATCACCC TATTTTGTTT TTCACCCTTT CCTTTGTGAT TCCTTGGGTA
TTGTGGTTTG TGGTGGCTTA TTGGAGTCAC CAACCCAAAG CACCTAATGC TTTTTGGACA
GGCTTTTTTG AATTGGCAGG CTTGTTAGCG CCTATGGGTG TGGCTACCTA CCTCTTTACA
CGCAATAAGG AACTATTATC CGACCTTAAA GGACGTTTTG TAGGCAAAAA TTTGCTCGCC
AACCGCTATT TTTGGATTAC CCTCTTGTTT TCACCCCTTT CCATTGTGGT GGCACAGCTA
CTTTCACTCG ATTTAGGGCA TAGTCTCAAC CAGTTTTACA TTTCAGGAGA GCCTAGTTTC
AGTTCAGCAC CTTTCAACGC TTGGTTTGTG CTCTGTTTGG CGCCAGTGGT CGAAGAATTG
GCTTGGCATA CTTATGGCAC TGATGCCTTG CGCAGTAGGT GGACGCTTTT CACCTCATCG
CTCATCTTTA CCGTTTATTG GGGGTTGTGG CATTTGCCCT TGTTCTTTGT AAAAGACTAC
TACCAAAGCA ACATACAAGC GGAAGGGTGG ATTTATACGG CTAACTTTTT TGTGAGTCTG
TTTTCATTTG TGTTTATCAT CAACTGGTTG TATTACAAAT CGGGGCGCAA TGTGCTAGTA
GCGATATTGT TCCATTTGGT AGCCAATGTT TCTAACGAAA TCTTTGCCAC CCATCCCGAT
AGCAAACTGA TACAAACAGG CTTATTTGCC CTACTGATGG GCTATATATT AGTGAAAGAA
AGACGATTGT TTTTTAGTAG GTAA
|
|---|
| Protein sequence | MKKYNHPILF FTLSFVIPWV LWFVVAYWSH QPKAPNAFWT GFFELAGLLA PMGVATYLFT
RNKELLSDLK GRFVGKNLLA NRYFWITLLF SPLSIVVAQL LSLDLGHSLN QFYISGEPSF
SSAPFNAWFV LCLAPVVEEL AWHTYGTDAL RSRWTLFTSS LIFTVYWGLW HLPLFFVKDY
YQSNIQAEGW IYTANFFVSL FSFVFIINWL YYKSGRNVLV AILFHLVANV SNEIFATHPD
SKLIQTGLFA LLMGYILVKE RRLFFSR
|
|---|
| |