| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1285 |
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| Symbol | |
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| ID | 8367715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1496745 |
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| End bp | 1500986 |
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| Gene Length | 4242 bp |
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| Protein Length | 1413 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983714 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_003141394 |
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| Protein GI | 256820115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA CAAAGAAAAT TAATCCCGAC TATGTGTTTG AAACCAGTTG GGAAGTATGT
AACAAAGTAG GAGGTATTCA CACAGTGATT ACCACAAAAG CTCCGAGTAT TGCGAAACAA
TTCAGAAGGA AATACATTCT GATTGGTCCC GATATTTGGC AACACAACGA AAATAAAGAA
TTTGTAGAAA ACCCCGAACT CTTCAAATCG TGGCGTGCTA AAGCAGCTTC TGAGGGCTTG
CGCGTGCGTG TGGGGAATTG GAAAATAGAA GGCAACCCCA TAGTAATTCT CGTAGATTTC
TCTCATTATG TAAGTGCTAA AAACGAGATT TTGCGCTATT ATTGGGATAA CTATAAGCTC
GATTCTTACA ACAGTCCGTG GGATTACGTA GAGTCGGTGC TTTTTGGTTA TGCAGTAGGG
AAGGTGATTG AGAGCTTTGT GAAGTTCAAC ACTGCTTCAC GCGAAAACGT GATTTGCCAT
TTCCACGAAT GGATGACCGG TAGTGCGCTA CTCTATTTGG AAGAAGAAAT GCCTAAAATA
GGTTCGGTAT TCACTACTCA CGCTACCGTA GTAGGTCGTG CGATTGCCGG CAATGGTTAT
CCGCTCTACA ACGATATGAA GAACTACAAA CCCGAAGAAA TGGCCTATCG GTTTGGGGTA
CAACACAAGC ACTTCCTCGA AAAAGAAACT ACCAAAGTAG CCGATTGCTT CACTACGGTA
AGCGAAATTA CTGCCCAAGA AGCGTTGCAC TTCCTCAGTA GAAAAACTGA TATCATCACG
CCTAATGGCT TCAACGACGC CATAGTACCA GCTGAAAAAG ATTTTGATAA GAAGCGTGCA
GAAGCTAAAC AGCGTCTTAT CAGCGTAGCA CAGGCTTTGG TAACCCAACC TATTAGCAAG
GATACCAAAA TTGTAGCTAT CAGCGGTAGA TATGAGTTCC GCAACAAAGG TATCGATGCC
TTTATTGATG CCTTGGGAGC ACTGAATAGG AATTCTAATA ACAAGAAAGA GCTTTTGGCT
TACATCTTAA TTCCTACAGC TCACGATGCG CCTAACCAAG GATTGCTAAA CAATTTGCAC
AACCCTCAGC AAACTACCGA AAACGAACAA AAGCACCTTA CCCATATTCT CCCTGATGTG
TATCACGATG TGATAATGAC TCGTATTTAT GAGCAACAGC TCTTCAATAG GAAGGAAGAT
AAGGTAAAAG TGATTTTCTG TCCAAGTTAT CTCAATGGCA ACGACGGGGT GTTCAACCTT
TCTTATTACG ACTTGCTCAT CGGGTTAGAC GGCACCGCTT TCCCATCGTA CTACGAGCCT
TGGGGCTATA CACCGCTTGA AAGTTTAGCT TTTAAAGTAC CTACCATTAC CACTACTTTG
GCAGGTTTTG GCAAGTGGGT GAACGATTAT TACCCCGAAA AACAAAAAGC GATAGAAGTA
GTACCGCGCA CTGATAGCAA CTACGGTGAG GTAGTAGGCG CAATTGCTAA GAATATTCAG
AATTTATTAG ACAGGAAAGA ACAAGACTTC CAAGAGCTTC GCGAAACAGC AGGTAAAGTA
TCAGAAATCG CTCTGTGGAA GAACTTAGTA CAATACTACA TAAAATGTTA TGAACTCACT
CTTGAAAATA TAGAGGACAG AGTGGAGAGT CTGCCTCCGG TAGAAACTGA TGGAGTGGCA
TATTTAGAGA AATCGAAGGT GGTGAACACG CCTAACTGGC GCAGTGTGAT TATCCACCGT
GCAATTCCAG AAGCCTTGCA ACCGCTCGAA GAACTCGCTA AAAACCTTTG GTGGTGCTGG
AATGACGAGG CTTACGAAGT TTTTAAATAC ATAGATAAAG CCCAATGGAT AGAAGTGCGT
AAAAACCCTA TTGCCTTGCT GGACAGCATC TCACTTACTC GTTATAAAGA ATTGGAGCAA
GATGCGGTAT TTATGCGCAA TCTTTCGAAA GTATATGGTG ATTTCCAAGC CTATATGGCT
AAGAAATCGG AGATGGTAAG TCCGTCTATC TCTTATTTTA GTATGGAATA CGGCTTACAT
TCTTCCTTGA AGATTTATTC AGGAGGTTTG GGTATCTTGG CAGGCGATTA CCTAAAAGAA
GCCAGCGACA AGGCAACCAA AATCACTGGA GTAGGGTTGT TATACCGCTA TGGTTATTTC
ACTCAAAAAC TATCCTCAGC AGGTAACCAA GAAGCCGACT ACGAAGCACA AGATTTCTCG
AAGATACCGG TAACGCCTGT AACAGATGAG AGTGGAAAAT GGTTGATTAT ATCAATAGAT
TTACCAGGTA GAACCCTATA TGCACGTGTA TGGCGTGTGG ACGTAGGTCG TATAGAGCTT
TATCTTCTCG ACACCGATTT TGAGAACAAC CGCGAAGACG ACCGTTCTAT CACCCACCAC
TTATATGGAG GCGACTGGGA AAACCGTCTT AAACAAGAAA TGTTATTAGG TTTAGGAGGT
ATTAAGATGT TGCGCAAGCT AGGTATCGAC AGTGATATTT ACCACTGCAA CGAAGGGCAC
GCTGCCTTTA TAGGGTTGGA ACGCCTCAGC GAGTATATCC AAAACGAGAA CCTTACTTTC
TCGGAAGCGA TGGAAGTGGT GCGCGCTTCA TCGCTCTTTA CTACTCACAC CCCAGTACCC
GCAGGTCACG ATGCTTTTGA AGAAGGCTTA TTACGCGCTT ATTTAGGAAA TTACGCCGAT
ATATTGCACG TGAATTGGGA ACAAATACTC GCTTTGGGTA AAATAAACTT GCAAAACCCA
CACGAGAAAT TCTCGATGAG TAACCTCGCA GCGAACCTTT CGCAAGAAGT AAACGGTGTG
AGCTGGCTAC ACGGTGAGGT AAGTAAAGAA ATCCTCAAAG ACTTGTGGCC AGGTTATATG
CCCGAAGAAC TTCACGTTAG CTATGTAACC AATGGGGTAC ACCAACCTAC GTGGACAGCT
GGCTTGTGGA AAGAAGTAGA AAACGAGGTG TTTGGCAAAG ACTACAAAAC ACATCACTAC
GACCCTAAGA GCTTTGAGGG CATCTATAAG GTATCTGACC AACGCGTGTG GGAAATCAAA
ACGGCTCTTC GTTCTAAGCT CTTGCGCCGT GTAGAACAAA AGCTGCGTTT AGAGAAGAAC
ACCCCTTATT TCTCTCCACG TCAGTTAGTG GAAATCAAAG AGAACTTACG CGAAGATATC
CTTACCATTG GTTTTGCACG TCGTTTTGCG ACCTACAAAC GCGCTCATTT GCTCTTTACC
AATATAGAGC GTTTGGATAA AATAGTGAAC AATCCTGAGC GTCCTGTACA GTTCATCTTT
GCAGGGAAAG CCCACCCTGC CGATAAAGCA GGACAGGATT TGATTAAGAA TATTGTGGAA
ATCTCTAAAT TACCACAGTT CTTAGGTAAG ATATTATTCG TTCCTAACTA CGATATGGAG
CTCGCGCGCC ATATGGTACA AGGAGTAGAT GTATGGATGA ATACCCCTAC ACGTCCGCTA
GAAGCCTCAG GAACCAGTGG TGAAAAAGCT GCGATGAACG GGGTAATGCA CTTCAGCGTA
CTTGATGGTT GGTGGGTAGA AGGGTATCGG GAAGATGCCG GTTGGGCTCT CCCTATGGAA
CGCTCCTACG AAAACCAGCA GTATCAAGAC GAAATGGATG CAGAGACGAT TTACAACATT
ATTGAAGACG AGATAGCTCC TATATTCTAT GATAAGAATA AAGATGGCAT CTCATCACGC
TGGTGTGCAC TCATCAAGAA TACCATTGCC AAAGTGGCGG TAAACTTTAC CACTACTCGT
ATGCTCACTG ATTACGAAAA GCAATACTAT TACCCAATGA CTGAGCGCGT AACCAAGATT
AAAGACAATC ACTTTGCAAT CGCTATTGAA CTTTCGAACT GGAAACGCAA AGTTACTCAA
GAATGGGATA ATATAAAGGT AGTGAGCTTT AAGGTACCTA ATCGCAATGA GCAACTCATT
TCTATTGGTA AGGTATACAA AGGTGAAATT ACCTTAGAAT TAGGAGAATT ACGTCCTGAA
GACGTAGGAG TAGAATTGGT AGTAGCCCAA CATAAAGACG ATAAGTTTAA AGTACTCTCG
ACAAGTGAGT TTACGGTAGT AGCTCAAGAA GGCAACAAAG CTACCTATCA ATTGGAAATT
GCCTCAGAAT ATCCAGGTGC TTTGCACTTA GCAATAAGAA TTTTCCCTAA AAATAATTTA
TTGCCACACC GCCAAGATTT CGCTTTGGTA AAATGGCTAT AA
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| Protein sequence | MSNTKKINPD YVFETSWEVC NKVGGIHTVI TTKAPSIAKQ FRRKYILIGP DIWQHNENKE
FVENPELFKS WRAKAASEGL RVRVGNWKIE GNPIVILVDF SHYVSAKNEI LRYYWDNYKL
DSYNSPWDYV ESVLFGYAVG KVIESFVKFN TASRENVICH FHEWMTGSAL LYLEEEMPKI
GSVFTTHATV VGRAIAGNGY PLYNDMKNYK PEEMAYRFGV QHKHFLEKET TKVADCFTTV
SEITAQEALH FLSRKTDIIT PNGFNDAIVP AEKDFDKKRA EAKQRLISVA QALVTQPISK
DTKIVAISGR YEFRNKGIDA FIDALGALNR NSNNKKELLA YILIPTAHDA PNQGLLNNLH
NPQQTTENEQ KHLTHILPDV YHDVIMTRIY EQQLFNRKED KVKVIFCPSY LNGNDGVFNL
SYYDLLIGLD GTAFPSYYEP WGYTPLESLA FKVPTITTTL AGFGKWVNDY YPEKQKAIEV
VPRTDSNYGE VVGAIAKNIQ NLLDRKEQDF QELRETAGKV SEIALWKNLV QYYIKCYELT
LENIEDRVES LPPVETDGVA YLEKSKVVNT PNWRSVIIHR AIPEALQPLE ELAKNLWWCW
NDEAYEVFKY IDKAQWIEVR KNPIALLDSI SLTRYKELEQ DAVFMRNLSK VYGDFQAYMA
KKSEMVSPSI SYFSMEYGLH SSLKIYSGGL GILAGDYLKE ASDKATKITG VGLLYRYGYF
TQKLSSAGNQ EADYEAQDFS KIPVTPVTDE SGKWLIISID LPGRTLYARV WRVDVGRIEL
YLLDTDFENN REDDRSITHH LYGGDWENRL KQEMLLGLGG IKMLRKLGID SDIYHCNEGH
AAFIGLERLS EYIQNENLTF SEAMEVVRAS SLFTTHTPVP AGHDAFEEGL LRAYLGNYAD
ILHVNWEQIL ALGKINLQNP HEKFSMSNLA ANLSQEVNGV SWLHGEVSKE ILKDLWPGYM
PEELHVSYVT NGVHQPTWTA GLWKEVENEV FGKDYKTHHY DPKSFEGIYK VSDQRVWEIK
TALRSKLLRR VEQKLRLEKN TPYFSPRQLV EIKENLREDI LTIGFARRFA TYKRAHLLFT
NIERLDKIVN NPERPVQFIF AGKAHPADKA GQDLIKNIVE ISKLPQFLGK ILFVPNYDME
LARHMVQGVD VWMNTPTRPL EASGTSGEKA AMNGVMHFSV LDGWWVEGYR EDAGWALPME
RSYENQQYQD EMDAETIYNI IEDEIAPIFY DKNKDGISSR WCALIKNTIA KVAVNFTTTR
MLTDYEKQYY YPMTERVTKI KDNHFAIAIE LSNWKRKVTQ EWDNIKVVSF KVPNRNEQLI
SIGKVYKGEI TLELGELRPE DVGVELVVAQ HKDDKFKVLS TSEFTVVAQE GNKATYQLEI
ASEYPGALHL AIRIFPKNNL LPHRQDFALV KWL
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