Gene Coch_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1281 
Symbol 
ID8367711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1491960 
End bp1492757 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content34% 
IMG OID644983710 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003141390 
Protein GI256820111 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCT CTGAAGCAAT TAGTATCACA GATAAATTAT TTGAGCTCTA CAAAAAAAAG 
ATAGAGGTAA ACATTCCTCT ATCTCTCTCA AAAATAAAAG AAATACCTCT TACAAAGGAG
AGTTTTCAGT TCTATACGGC TGTTTCTTCT ATGGCTTCTT CGAAAATTGA AGGAGAAGTA
TTAGACATCG ATAGCTATTT GAAACATAAA TTAAATGGAG TAATTTATCA AAAAAACTTA
GTTGAAAAAC CTAATGATGT ATTTGCTGCC TACACTTTTG CTCAGAACTC CCCCCTTACT
GTTGCTAACT TACTGAAAGC GCATAAAATT ATTACAAAGA ATTTGCTAAC CGCCAGTTCA
CAAGGAAAAG TGCGTACTTC GGATATGATT ATACGCGATG TGGCAAAAGG AATCGTTATC
TATGAAGCCT GCGCTAAGGA AGAAGTGAAA AGTGAGTTTG ACGCTTTTTG TAATTTCTTA
GAAGAGCTCA TAAAACGAAC ATTATCTGTA CAGGAAACGT TCTTCTATGC CTCATTATTG
CACTTATTTT TAGTAAAGAT ACACCCTTTT GACGATGGTA ACGGGCGTAC AGCGCGCTTG
CTCGAAAAAT GGTTCTTAGC TGAAAAAATA GGTAAAAATG CTTGGTTTAT ACCCTCTGAA
ATGAATTATT GGGAACAGCG TGAAACTTAC TACAAGAATA TAGCTCTGTT AGGGTTCTTT
TACGAAAAAC TGAATTATAA TAACAGCATA CCTTTCTTAC TAATGCTACC TAACTTTTTG
AAAAATACTA CTCAATAA
 
Protein sequence
MKVSEAISIT DKLFELYKKK IEVNIPLSLS KIKEIPLTKE SFQFYTAVSS MASSKIEGEV 
LDIDSYLKHK LNGVIYQKNL VEKPNDVFAA YTFAQNSPLT VANLLKAHKI ITKNLLTASS
QGKVRTSDMI IRDVAKGIVI YEACAKEEVK SEFDAFCNFL EELIKRTLSV QETFFYASLL
HLFLVKIHPF DDGNGRTARL LEKWFLAEKI GKNAWFIPSE MNYWEQRETY YKNIALLGFF
YEKLNYNNSI PFLLMLPNFL KNTTQ