Gene Coch_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1273 
Symbol 
ID8367703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1482745 
End bp1483731 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content46% 
IMG OID644983702 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_003141382 
Protein GI256820103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCAC TGAGAAGAAA CCGCCGTTTG CGCGTAAACG ATACGGTACG TAGTTTGGTA 
AAAGAAACGA TTGTTACCCC CGATGATTTT CTTGTACCTC TCTTTGTAGT TGAAGGTACT
GGCGTAAAAG AAGAAATAGC CTCTATGCCG GGTTATTACC GTTATAGCCT CGACCTATTA
ACAAAAGAAG TAAAAGAGCT TTGGAGCTTA GGACTCAAAT CGGTATTACT GTTTGTGAAA
GTGCCTGACG CTCTTAAAGA CAACAAAGGC GTAGAAGCAG CCAACCCTAA TGGCTTGATG
CAACGCGCTA TTAAAACTGT GAAAGAAGCA GTGCCCCAAA TGCTCGTAAT GACTGATGTA
GCACTCGACC CTTATTCCAT TTATGGTCAC GATGGCATTG TGGAAAACGG ACGCATTGTG
AACGATGCTA CTGTAAATGC TCTTTGTACA ATGGCACTCT CACACGCTCA GGCAGGTGCT
GATTTCATCG CGCCCAGCGA TATGATGGAC GGACGTATCC TCGCCTTGCG TGAAACCCTT
GAAGACAATA GCTTTGAGCA CGTAGGGATA ATGGCTTATA GTGCCAAGTA CGCCTCAGCT
TTCTACGGAC CTTTCCGCGA TGCACTCGAC AGTGCTCCCG TAGACCAACA GGATATCCCT
AAGGATAAGA AAACTTACCA AATGGACTAT CACAACCGCC TCGAAGCTTT ACGCGAAACC
CGTATGGATA TAGAGGAAGG TGCTGATATT GTGATGGTAA AACCAGGGCT TTGCTATTTA
GACATCGTTC GCGAGGTGAA GAATATGAGC GAAGTGCCCG TGGCTGTTTA CCAAGTATCG
GGTGAATACG CAATGCTGAA AGCTGCTGCT GCCAACGGTT GGCTCGATCA CGATGCTGTA
ATGATGGAAC AAATTGTGAG CATCAAGCGT GCTGGTGCCG ACCTTATCGC TAGCTATTTT
GCTAAGGAAG TCGTAAAACT TTTATAG
 
Protein sequence
MYPLRRNRRL RVNDTVRSLV KETIVTPDDF LVPLFVVEGT GVKEEIASMP GYYRYSLDLL 
TKEVKELWSL GLKSVLLFVK VPDALKDNKG VEAANPNGLM QRAIKTVKEA VPQMLVMTDV
ALDPYSIYGH DGIVENGRIV NDATVNALCT MALSHAQAGA DFIAPSDMMD GRILALRETL
EDNSFEHVGI MAYSAKYASA FYGPFRDALD SAPVDQQDIP KDKKTYQMDY HNRLEALRET
RMDIEEGADI VMVKPGLCYL DIVREVKNMS EVPVAVYQVS GEYAMLKAAA ANGWLDHDAV
MMEQIVSIKR AGADLIASYF AKEVVKLL