| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1271 |
|---|
| Symbol | |
|---|
| ID | 8367701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1479789 |
|---|
| End bp | 1481804 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644983700 |
|---|
| Product | Oligopeptidase A |
|---|
| Protein accession | YP_003141380 |
|---|
| Protein GI | 256820101 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAAA CACCTTATAA CGCAGCGCCC TTTTCGCGCT TTGCTCCTAC CGACTATCTA
CCAGCGATCC AAAAAGCTAT TGCCAAAAGC CTCAAAGAAA TCGATACCAT TGCTCATAAT
CCAGAAGTGC CTACCTATAT GAATACAATA CAGCCTTTGG CTTATGTGGG ATTAGAACTC
GACCGACTTA CCGCGATGTT CTTCAACTTG AACAGTGCCG AAACTAACGA AGCCCTGCAA
GCAGAAGCTC AACGCATCTC GCCTCTGCTC ACCGATTACA GCAACGATAT CCGTTTGAAC
GAAGCACTTT TTAAACGTGT AGAAACAGTT TACAAAACCC GCAATTACCT TTCCGCTTCA
CCAGAACAAC ATACTCTACT TGAAAAGACT TATAAGAGTT TTACTCGCAA TGGTGCAAAT
TTATCATTGA ATGATAAAGA GCATTTGCGC AGAATTGACA AGGAATTAGC GCGCCTCAAA
CTGAAGTTTT CAGAAAATGT ATTGGCTGAA ACACAGCATT ATCAATGGGT GATTAGCCAT
AAAGAAGAGC TCAGCGGTCT ACCCGACTTT GTATTAGAGA TGCTCGCTAC CGAAGCCAAA
AAGCACCATA AAGAAGGCTG GGTGATTACC CTCGACCTGC CTGTCTATAC CGCCGTGATG
AAATATGCTA ATAACCGTGA GTTGCGCCGT AAACTTTTTA TTGACTATCA CAGCCGTTGT
GCAGGTGATA GTGCTTATAA TAACGAAGCC AATGTGTTGC GTATCGCTGA GTTACGTGCC
CAACGCGCCT CACTATTGGG TTATCCCGAT TATGCCTCTT TGGTATTAGA AGAACGTATG
GCAGAAACAT CAGAAAAGGT AATGGATTTC TTGAATAAAC TTTTAGCTAA AGCCAAACCG
CAAGCAATCA AAGAATTAGA AGAGCTAAAA GCCTTTTCAG GACTTGATGA CTTTCAGCAA
TGGGATTTTG CTTATTATGC CGAAAAACTG AAACAACAGC GCTATCAAAT AGATGATTCT
CTATTAAAAC CCTACTTATC TTTGGATAAA GCAGTGGAAG GAATGTTTGC AGTAGCACAT
AAGCTCTACG GTTTGCACTT CACCCTTACC GATGAGGTAG AAAAGTATCA CCCCGAAGTA
CAAACCTACA AAGTAACCGA TGATAAAGGA GAATATCTCG CCCTTTTCTA CACCGATTTC
TTTCCACGTA CAGGCAAACG CAATGGTGCG TGGATGACCT CTTACAAAGA GCAATACACT
GATACTGAGG GAAAGGATTC GCGTCCACAC ATTTCCATAG TGTGTAACTT CACGCGCCCT
ACTGCTTCGG CTCCTTCCTT GCTCACCTTC AACGAACTGA CAACTCTCTT CCACGAGTTT
GGGCACGCTC TTCACGGTAT GCTTTCTAAG GTTACGTATC CTTCTCTAAG CGGTACTAAT
GTAGCCCGCG ACTTTGTAGA GCTTCCCAGC CAGCTGATGG AGAACTGGTG TTACGAAGAA
GAAACCTTGC GTCTTTTTGC AACGCATTAC CAAACAGGTG AGCCTTTGCC CATAGAATGG
GTGCAAAAAA TAAAAGAAGC CAGTGTCTTT ATGGAAGGAC TTTTAAGTGT GCGTCAGTTA
AACTTTGGGT TCTTAGATAT GGCGTGGCAT ACCTATCCTC ATTTGGAACG CCTTGAAGAT
GTTCACACTT TCGAACAAAC AGTTACCAAA GAAACCCAAC TGTATCCAAC TATGGAAGCG
ATGTGTATCT CGCCTGCCTT TTCACATATT TTTAGTGGAG GTTATGCCGC AGGGTATTAT
AGTTACAAAT GGTCGGAAGT GCTAGATGCT GATGCTTTTG AAGTTTTTAA GGAAGCAAGT
ATTTTTAATA CTGAAGTAGC TACTCGTTTC CGTGGAGAAG TGCTCAGCAA AGGCAGTAGT
GAGAAGGAAA TGACCCTTTA CAAACGCTTT CGTGGAAAAG AGCCCTCTAT AGATGCTTTA
ATGAGAAGAG CAGGATTCGA CTTAGATAAG AGATAA
|
|---|
| Protein sequence | MFQTPYNAAP FSRFAPTDYL PAIQKAIAKS LKEIDTIAHN PEVPTYMNTI QPLAYVGLEL
DRLTAMFFNL NSAETNEALQ AEAQRISPLL TDYSNDIRLN EALFKRVETV YKTRNYLSAS
PEQHTLLEKT YKSFTRNGAN LSLNDKEHLR RIDKELARLK LKFSENVLAE TQHYQWVISH
KEELSGLPDF VLEMLATEAK KHHKEGWVIT LDLPVYTAVM KYANNRELRR KLFIDYHSRC
AGDSAYNNEA NVLRIAELRA QRASLLGYPD YASLVLEERM AETSEKVMDF LNKLLAKAKP
QAIKELEELK AFSGLDDFQQ WDFAYYAEKL KQQRYQIDDS LLKPYLSLDK AVEGMFAVAH
KLYGLHFTLT DEVEKYHPEV QTYKVTDDKG EYLALFYTDF FPRTGKRNGA WMTSYKEQYT
DTEGKDSRPH ISIVCNFTRP TASAPSLLTF NELTTLFHEF GHALHGMLSK VTYPSLSGTN
VARDFVELPS QLMENWCYEE ETLRLFATHY QTGEPLPIEW VQKIKEASVF MEGLLSVRQL
NFGFLDMAWH TYPHLERLED VHTFEQTVTK ETQLYPTMEA MCISPAFSHI FSGGYAAGYY
SYKWSEVLDA DAFEVFKEAS IFNTEVATRF RGEVLSKGSS EKEMTLYKRF RGKEPSIDAL
MRRAGFDLDK R
|
|---|
| |