| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1242 |
|---|
| Symbol | thyA |
|---|
| ID | 8367671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1451171 |
|---|
| End bp | 1451995 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644983672 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_003141353 |
|---|
| Protein GI | 256820074 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0595722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAT ATCACGACCT CTTGCGCCAT ATCCTCGATA ATGGCTATTC TAAAGATGAC
CGTACCGGCA CGGGAACGAC TAGTGTATTT GGTTACCAAA TGCGCTTTGA CCTCAATAAG
GGTTTTCCGC TGGTAACGAC TAAAAAGATA CACTTAAAAT CGGTTATCTA TGAATTACTT
TGGTTTTTAA AAGGAGATAC AAATATTAAA TATCTCACTG ACCACGGGGT GCGCATTTGG
AACGAATGGG CAGATGAGAA CGGCGACCTC GGTCCTGTTT ATGGAGCGCA ATGGCGCCAC
TGGAATGGCG AGGCGATTGA CCAGATAAAA ACGGTGGTAG AGACTCTTAA ACAAAATCCT
GAAAGCCGAC GGATTATCGT TTCGGCTTGG AATCCGTCGG TATTGCCTGA TACAGGAAAA
TCGTTTGCGG AGAATGTAGC CAATGGTAAA GCGGCATTGC CTCCTTGTCA CGCACTGTTT
CAGTTTTACG TAGCCGATGG GAAATTGTCT TGTCAGTTAT ACCAACGCAG TGCCGATGTG
TTTTTAGGAG TGCCTTTTAA CATTGCTTCA TATGCGTTAC TCACGATGAT GCTTGCGCAA
GTATGCGATT TGCAATTAGG AGATTTTGTG CATACTTTTG GTGATGTGCA CATCTATAAC
AATCATCGTG AGCAGGTAGC TTTACAGCTC AGCAGGACGC CACGCCCTTT GCCTACGATG
CACTTGAATC GGGCAGTGAA GGATTTGTTT GCCTTTGATT ATGACGATTT TCGTTTAGAA
GGCTATGACC CTTACCCTAC GATTAAAGCG CAGGTATCGG TATAA
|
|---|
| Protein sequence | MQTYHDLLRH ILDNGYSKDD RTGTGTTSVF GYQMRFDLNK GFPLVTTKKI HLKSVIYELL
WFLKGDTNIK YLTDHGVRIW NEWADENGDL GPVYGAQWRH WNGEAIDQIK TVVETLKQNP
ESRRIIVSAW NPSVLPDTGK SFAENVANGK AALPPCHALF QFYVADGKLS CQLYQRSADV
FLGVPFNIAS YALLTMMLAQ VCDLQLGDFV HTFGDVHIYN NHREQVALQL SRTPRPLPTM
HLNRAVKDLF AFDYDDFRLE GYDPYPTIKA QVSV
|
|---|
| |