Gene Coch_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1239 
Symbol 
ID8367668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1447082 
End bp1448203 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content45% 
IMG OID644983669 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_003141350 
Protein GI256820071 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATA TTTTAGGATA CGATACAATA AAGAACTATT TACAAGCCAG TGTGGAAGCA 
GGTCGCATTC CACACGCTCA ATTATTTGTG GCAGGCGAAG GACAAGGCGC TCTGCCAATG
GCAATCGCCT ACGCAACTCT CATTCTTTCG CACGATAACC CCAAGGCAAA GGCTCAATGC
GCCCAACTCG CTCACCCCGA CCTTCATTTT GCTTTCCCCA CAGCTATTAA TGACAAGGTC
AAAAAAGACC CTATTAGTGC TCTCTTTATG GACGAATGGC GCGCTTTTGT AAAAGAACAG
CCTTATGGTT CCCTTTTTGA TTGGCTCGTG TTCTTAGGTA TAGAGAAGAA ACAAGCCAAC
ATAGGGGTAA ATGAGGCTAA AGAGATTACC AATAAGTTAG CTCTGAAATC ATTTGAAGGT
GGTTATAAGG TAATGATTAT CTGGATGGCA GAGAAGATGA ATGCCGAAGC CTCTAACAAG
CTTCTTAAAC TCCTCGAAGA ACCCGCCGAC AAAACAGTCT TTCTCTTGGT GGTAGAAGAT
GAAAATGCCC TATTAGACAC TATCAAATCA CGTTGCCAAA TCCTGCGTTT CCCGCCCCTA
AGTGAGAATG CTATCAAAGA AGCCCTCGTA GAACGTGGTT TAGCTGATGC CGAAGCGACC
AAAATAGCTC TACGCGCTCA AGGAAACTTC AACAAAGCCC TCCAACTGAT GAACAACAAA
GAAAGCGAAG AAGCGATTTT TGAGCGTTGG TTTATTGCGT GGGTGCGTAC AGCTTACCGC
GCACGTGGCA ACAAAGCCTC CATACAAGGA CTTTTGCAGT GGAGTGACGA AATCAATACC
GTAGGGCGGG AGGCGCAAAA ACAGTTTTTG CAGTACTGCG CTGAGGTGTT CCGTCAGGCA
TTCCTACTGA ACTATACCGC CTCTGGTTTG GTATATATAC AATTCGCCGA CCCTACTTTT
CAACTTGCCA AATTTGCCCC TTTTATTCAC GGCGGTAATA TCGAGGCAAT ACACAACCTC
CTCGAAGAAG CCCAGTTACA CGTAGAGCGC AATGGCAATG GCAAAGTTAT TTTCACCGAT
TTAGCTATTA AACTCACCCG GCTATTACAC ACTAAGCAAT GA
 
Protein sequence
MDNILGYDTI KNYLQASVEA GRIPHAQLFV AGEGQGALPM AIAYATLILS HDNPKAKAQC 
AQLAHPDLHF AFPTAINDKV KKDPISALFM DEWRAFVKEQ PYGSLFDWLV FLGIEKKQAN
IGVNEAKEIT NKLALKSFEG GYKVMIIWMA EKMNAEASNK LLKLLEEPAD KTVFLLVVED
ENALLDTIKS RCQILRFPPL SENAIKEALV ERGLADAEAT KIALRAQGNF NKALQLMNNK
ESEEAIFERW FIAWVRTAYR ARGNKASIQG LLQWSDEINT VGREAQKQFL QYCAEVFRQA
FLLNYTASGL VYIQFADPTF QLAKFAPFIH GGNIEAIHNL LEEAQLHVER NGNGKVIFTD
LAIKLTRLLH TKQ