Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1238 |
Symbol | |
ID | 8367667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1445453 |
End bp | 1446784 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644983668 |
Product | adenylosuccinate lyase |
Protein accession | YP_003141349 |
Protein GI | 256820070 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACCG CAATTTCCCC CATCGATGGT CGTTATGCCG ATAAAACGAC CTCCCTTGTG CCTTTCTTCT CCGAAATGGC ACTCATTCGT TATCGCGTAC AAGTGGAAGT AGAGTACTTT ATCGCTCTAT GTGAACTCCC CTTGCCTCAA CTCGCCGATT TCCCTAAGGA AAGATACACC AACCTTAGAA GACTCTACCA AAATTTCACC GAAGAGGAAG CTCTAAAAGT AAAAGAAATA GAGCAAACTA CCAATCACGA TGTAAAAGCG GTTGAATATT TCATTAAAGA GGCTTTTGAT AAACTGCAAT TAGAAAAATA CAAGGAGTTT ATCCACTTTG GTCTCACCTC TCAGGATATC AACAATACCG CTATTCCACT TAGCATCAAG GAAGCTGTAC AACAAGTGTA TTTGCCTGCC TTGGAGCAAT TGCTCAGCAA ACTGAGAAGT TTAGTAACCC AATGGAGAGA TGTCCCTCTA CTAGCGCGCA CTCACGGTCA GCCGGCATCT CCTACGCGTT TAGGCAAGGA GTTCGAGGTG TTTGTCGTTC GTATAGAACA GCAGTTACAA ACCCTTATAT CAGTGCCTTA TGCTGCCAAA TTTGGGGGAG CTACCGGTAA CTACAACGCT CATAAGGTAG CCTATCCTAA TATCGATTGG AAGGCTTTCG GCACCCGCTT TGTAGAGGAA ATATTAGGCT TGCACCACTC TTTCCCTACT ACCCAAATTG AGCATTACGA CCATTTAGCC GCTCTTTTCG ATGCTCTCAA ACGCATCAAT ACGATTCTCA TCGATTTAAA CCGCGATGTT TGGACATATA TCTCTATGGA TTACTTCAAA CAACAGATAA AAGCAGGCGA GGTAGGCTCT TCGGCTATGC CTCATAAGGT AAACCCTATT GATTTTGAAA ACTCCGAAGG TAATTTAGGT ATAGCCAACG CTCTTTTAGA GCATCTATCG GCAAAATTGC CTATTTCCCG CTTACAGCGC GACCTCACCG ATAGTACTGT ATTGCGCAAT GTAGGAGTAC CTTTTGGTCA TACACTCATA GCCCTACAAT CTACCCTCAA AGGACTTAAT AAACTCCTTT TAAATGAGGA TAAAATCCGC GAAGATTTAC AAGACCATTG GGCAGTAGTA GCTGAGGCTA TCCAAACGAT TTTGCGTCGT GAAGGTTATC CTAATCCGTA TGAAGCCCTC AAAGCCCTCA CGCGCACTAA TACCGCTATC ACAGCCGAGA CTATCAGTAG TTTTATCGAT ACCTTGGAAG TGAATGAAGA TGTAAAGGCA GAACTAAAAG TTATAACGCC CGAGAACTAT ACGGGAGTTT AA
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Protein sequence | MLTAISPIDG RYADKTTSLV PFFSEMALIR YRVQVEVEYF IALCELPLPQ LADFPKERYT NLRRLYQNFT EEEALKVKEI EQTTNHDVKA VEYFIKEAFD KLQLEKYKEF IHFGLTSQDI NNTAIPLSIK EAVQQVYLPA LEQLLSKLRS LVTQWRDVPL LARTHGQPAS PTRLGKEFEV FVVRIEQQLQ TLISVPYAAK FGGATGNYNA HKVAYPNIDW KAFGTRFVEE ILGLHHSFPT TQIEHYDHLA ALFDALKRIN TILIDLNRDV WTYISMDYFK QQIKAGEVGS SAMPHKVNPI DFENSEGNLG IANALLEHLS AKLPISRLQR DLTDSTVLRN VGVPFGHTLI ALQSTLKGLN KLLLNEDKIR EDLQDHWAVV AEAIQTILRR EGYPNPYEAL KALTRTNTAI TAETISSFID TLEVNEDVKA ELKVITPENY TGV
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