Gene Coch_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1234 
Symbol 
ID8367663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1441686 
End bp1442102 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content45% 
IMG OID644983664 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003141345 
Protein GI256820066 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTGGT TCGTTTTTGC ACTACTTTCG GCTATCTTTG CTGCTCTTAC CGCTATTCTT 
GCCAAAATAG GCATTGAAGG GGTCAATTCT AATGTAGCGA CTGCTATCCG CACAGTGGTA
GTTGTGTTGC TGGCGTGGGC AATGGTTTTT ATCACCCAAA GTCAGCATAA TATTGCCCAG
ATAAGCCAGC GCAGTTGGCT CTTTCTTATC CTCTCAGGAA TTGCCACAGG GGCATCGTGG
TTGTGCTATT ACAAAGCCCT GCAAATGGGA GAAACTACCA AAGTTGTTTC GGTAGATAAA
CTAAGTATCG CCATCACCTT TGTTTTGGCT ATTATCTTCC TACACGAAGA CTTCACCCTT
AAATCGGTGA TAGGTGTCTC GCTCATTACC ATAGGTACCT TGGTGATGAT ATGGTGA
 
Protein sequence
MMWFVFALLS AIFAALTAIL AKIGIEGVNS NVATAIRTVV VVLLAWAMVF ITQSQHNIAQ 
ISQRSWLFLI LSGIATGASW LCYYKALQMG ETTKVVSVDK LSIAITFVLA IIFLHEDFTL
KSVIGVSLIT IGTLVMIW