Gene Coch_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1228 
Symbol 
ID8367656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1434881 
End bp1435531 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID644983657 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_003141339 
Protein GI256820060 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.294242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTAT CTGAAGAAAA CCACTTGAAA GCTATCTTTC ACCTTTATAA CGAAAAGAAA 
GAAGAGGTGA ATACCAATGC TATTGCCGAA GTGATGAATA CCAAAGCTTC ATCAGTAACC 
GATATGCTTA AAAGGTTAGC CGATAAGGGA CTCATCAACT ATGTAAAATA TCAAGGGGTA 
ACACTCACTA AAAAAGGTAC GCAAAAAGCT ATTGCTATCA TTCGCAAACA TCGTCTTTGG 
GAAGTATTCT TAGTCGAAAA ACTCAATTTC TCTTGGGACG AAGTGCACGA AATAGCCGAA 
GAGTTAGAAC ATATACAGTC AGAAAAACTT ATAGAGCGCC TCGATGCTTT CCTCGATTTT 
CCTAAAAAAG ACCCCCACGG CGACCCGATT CCTAACAAAG AAGGCGTTTT TACCACCACT 
ATTCAAACCC TATTAAGCGA GCTCAAACAA GGCGATAAAG GTATATGTGC AGCGGTAAAG 
AACACCTCTA AGGAATTTCT CGTTTACCTC AACAAAATGA ATATAGCTCT TGGCGACGAA 
ATAGAAGTAC TCAGCAAAGA ACCCTTCGAC GACTCTATGA CTCTACTGGT AAACGACAAA 
CAAATCAACC TATCAGCAAT GGTATGCCGA AATATTTATG TCAATGGTTA G
 
Protein sequence
MTLSEENHLK AIFHLYNEKK EEVNTNAIAE VMNTKASSVT DMLKRLADKG LINYVKYQGV 
TLTKKGTQKA IAIIRKHRLW EVFLVEKLNF SWDEVHEIAE ELEHIQSEKL IERLDAFLDF 
PKKDPHGDPI PNKEGVFTTT IQTLLSELKQ GDKGICAAVK NTSKEFLVYL NKMNIALGDE 
IEVLSKEPFD DSMTLLVNDK QINLSAMVCR NIYVNG