| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1225 |
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| Symbol | |
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| ID | 8367653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1432430 |
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| End bp | 1433233 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983654 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_003141336 |
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| Protein GI | 256820057 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0314273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA CCAGTACTCA AAACCCCCTA ATAAAGAAAA TAGTTCTCCT CAGCGAGAAA
TCACGCGAGC GTAAAAAAGA AGGAATATGT GTAGTAGAAG GTGCGCGCGA GATACGCTTA
GCCCTTGAAG GAGGCTACAC TCTCGAAACA TTGCTATATC AGCCTGAGAT TTTTGCAGAA
GAACACTTGC TAAAACTTCT TAGCCATACA GCTCAAAGAG TAAATCCTAT CGCTATTAGC
AAAGAAGTAT ACCAAAAGAT TAGTTATCGC AGTTCTACTG AGGGGGTTAT TGCCTTAATA
CAGACTAAAA AGCACAGTTT AGACACGCTA GCTTTTGTAA CCGACTCTCC TTTGTTATTG
GTAGCTGAAG CTCCTGAAAA ACCAGGGAAT ATAGGGGCTC TCCTTCGCAC TGCCGATGCT
GCTAATATAG ACGCTGTGAT TATTGCCAAT CCTAAAACTG ACCTCTACAA CCCTAATATT
ATACGTTCGA GCGTAGGTTG TGTGTTTACT GTTCCTATTG CAACGGGGAG CACTACTGAA
GTGATTGATT TTCTCAAAGC CAAAGGTATC AATAGCTATT GCGCTGCTCT TACTGCCTTT
AAACCTTATT ACGAAGTATC GTTTGAGGAA GCCAGTGCTA TCGTAGTAGG TACGGAAGAC
CAAGGTCTTA CAGAGGAATG GCTTACTCAT AGCACTCAGA ACATTATTAT CCCGATGGAA
GGTGTAATCG ACTCTATGAA TGTATCAGTT GCTGCTGCGG TACTTATTTT TGAAGCGAAA
AGACAAAGGG TAAATCTTAA TTAA
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| Protein sequence | MNITSTQNPL IKKIVLLSEK SRERKKEGIC VVEGAREIRL ALEGGYTLET LLYQPEIFAE
EHLLKLLSHT AQRVNPIAIS KEVYQKISYR SSTEGVIALI QTKKHSLDTL AFVTDSPLLL
VAEAPEKPGN IGALLRTADA ANIDAVIIAN PKTDLYNPNI IRSSVGCVFT VPIATGSTTE
VIDFLKAKGI NSYCAALTAF KPYYEVSFEE ASAIVVGTED QGLTEEWLTH STQNIIIPME
GVIDSMNVSV AAAVLIFEAK RQRVNLN
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