| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1223 |
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| Symbol | |
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| ID | 8367651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1430305 |
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| End bp | 1432077 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983652 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_003141334 |
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| Protein GI | 256820055 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000375913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTTT TAAAAACTCT CTTAGCCACT ATCCTCGGAT TCTTTATTTC TATGGGGATA
TGTTTTATTC TTTTCCTCAT CTTCATCTCT GTGATGATAA GCTCAGTGGT AGGTGGTGCC
AAAGGTGAAG AAGTGAGTGT GAAGGACAAT TCTGTACTCG AACTTTCTTT TGAAGAACCA
TTAGTAGACT ACGGCGAACG CATAACCTTT AAGGATTTCG ACTATACCTC TGAATCCTAT
AACGGACTTA ATGCAACTCT CAAAGCTATT GAGAACGCCA AAACCGACAA GCGTATCAAA
GGTATTTACC TCAAAAGTAC GGGTAACATC GGCGGATTAG CTTTCGCTCA AGAACTTCGT
AAAGCTTTGG AGGATTTTAA GACTTCTGGC AAATTCGTCT TAGCTTATAG CGATGAAATT
TCCCAACTCG ATTACTATCT CCAAACCGTA GCCGATAAGG TGTATATTAG TCAGCTCGGA
AGTGTTGCGC TCCGGGGTCT CTCTTCTGAA GTCCTTTTCT TCAAAGGGCT CCAAGAAAAA
AGCGGTGTGC AAATGGAAGT GATTCGCCAC GGCAAATACA AAAGCGCTGT AGAACCTTTC
TTAGACAATA AGATGAGCGA TAACAACCGC AAGCAACTCA CCGAATTACT CTCTGCTATG
TGGAACGTCA TCGTTACCGA TATCGCTAAA AGTCGTAATA TTCCCGTAGA AAAACTCAAT
GAAATAGCTA CCAATGTAGG TGGACGCACA GCACAGTTAG CTAAAAACAA CGGACTCATA
GACGGTATTC TTTTCCGCGA TGAATTCGAG CAAATCATCT GTGATAAAAC CGGTAGTAAA
AGTATCGATA AGGTTGATTT TATCAATATT GAAGATTATG CCGAAGCCGT AGTAGGCAAA
GCAACGGGCA AGCACTCCAA AAATAAGATA GCTGTTATCT ATGCCGATGG TGAGATTATG
CAAGGCGAAG GACGCGCTGA AATCGTAGGT AATGAAACCA TTATCCGTGC CTTGCGCAAA
GCCTCTGATA ATAAAGATAT AAAAGCTATT GTGCTTCGTA TCAATTCCCC TGGTGGCGAT
GCCTTAGCCT CTGAATTGAT GCACCGAGAA ATCGAAGTTA CTAAAAAGAA GAAAAAGGTA
TATGTCTCTA TGGGCAACTA TGCCGCTTCT GGTGGCTATT ATATTGCGTG CAATGCTAAC
CGCATTTTTG CAGAAGCAGG TACTATCACC GGTTCTATTG GGGTATTCGG CGTAATTCCT
AATGTAAATG CCTTAGCTAC CAACTGGGGT ATAAATGCCG AAACCGTAAG CACTCACCCC
AACGCTCAGT TTTATAGTGT ATTCCAAAAA CCTACTGAAC AATTCAAAAA AGAAATGACC
GAATCTATTG AGCAAGTATA TACTGTATTT TTAGATCGTG TAGCCAAAGG GCGTGGTAAA
ACGGTTGCCC AAATAGACTC CATTGCACAA GGAAGAGTAT GGAGCGGTAA AGAAGCCCTT
GCTAATGGTT TGGTAGACGA AATCGGCTCG CTAAACGATG CTATTGCCTA CGCTGCTAAA
GACAACGGAC TCAAAGAATA TCGCACCGTT TCTTACCCTA CTTTCGAAAT GGACTTTAAA
GCAATGTTCC GCCGTTTTGG AGCGAATCTG AGAGGTGAGA ACTTGCGCAA TGAGATGGGT
GTAGAAGCTT ATGAAGTCTA TCAGCAGGTG AAACATATCG CTCAGCAACG TGGAGTGCAA
GCCCATTTAG AATACGATGT GAAACTGAAA TAG
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| Protein sequence | MTFLKTLLAT ILGFFISMGI CFILFLIFIS VMISSVVGGA KGEEVSVKDN SVLELSFEEP
LVDYGERITF KDFDYTSESY NGLNATLKAI ENAKTDKRIK GIYLKSTGNI GGLAFAQELR
KALEDFKTSG KFVLAYSDEI SQLDYYLQTV ADKVYISQLG SVALRGLSSE VLFFKGLQEK
SGVQMEVIRH GKYKSAVEPF LDNKMSDNNR KQLTELLSAM WNVIVTDIAK SRNIPVEKLN
EIATNVGGRT AQLAKNNGLI DGILFRDEFE QIICDKTGSK SIDKVDFINI EDYAEAVVGK
ATGKHSKNKI AVIYADGEIM QGEGRAEIVG NETIIRALRK ASDNKDIKAI VLRINSPGGD
ALASELMHRE IEVTKKKKKV YVSMGNYAAS GGYYIACNAN RIFAEAGTIT GSIGVFGVIP
NVNALATNWG INAETVSTHP NAQFYSVFQK PTEQFKKEMT ESIEQVYTVF LDRVAKGRGK
TVAQIDSIAQ GRVWSGKEAL ANGLVDEIGS LNDAIAYAAK DNGLKEYRTV SYPTFEMDFK
AMFRRFGANL RGENLRNEMG VEAYEVYQQV KHIAQQRGVQ AHLEYDVKLK
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