Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1219 |
Symbol | |
ID | 8367647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1424846 |
End bp | 1425745 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983648 |
Product | ABC transporter related |
Protein accession | YP_003141330 |
Protein GI | 256820051 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.538125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAG AAGTTCAACA ACTAACAAAA ATATACGGAC AGCAAGTGGC TGTCAATGCT ATCAGTTTTC AACTTGAAAA AGGTGAAATT ACCGGCTTTT TAGGACCTAA TGGAGCAGGT AAATCTACTA CTATGAAAAT GATTACAGGA GCGCTTACCC CTACTGATGG AACAATAACA GTAAATGGCA TTGATATACT AAAAAATCCT ATTGAAGCAC AGAGAACAAT AGGGTATTTG CCTGAACACA ATCCGTTGTA TACCGAAATG TACGTGCGAG AATACCTGCG CTTTATGGCT GAACTATACC CCAAAGTCCC CTCCGATAGG ATTGAAGAGG TAATTGCTCT TACAGGGCTT TCTTCTGAAA GCGATAAGAA GATAGAGGCG CTCTCCAAAG GCTATCGCCA GCGTGTAGGC TTGGCTTCTG CGCTTATTCA CGACCCCGAA ATTCTTATAC TCGATGAACC TACCACAGGG CTCGACCCCA ATCAGCTGGT AGAAATACGC CATATTATCA AAGAGTTAGG TAAGCGTAAA ACAGTGTTAC TATCTTCTCA TATTATGCAA GAAATTCAAG CTTTGGCTGA CCGTGTGATT GTATTGCATA AAGGTAACAT CGTGTTAGAT AAGAAAATGA CCGAACTGCA AAACAAAGAA CAAATTATAG AAGTAGCTTT TGATTTTCGT GTCGAAGAAC GCCTCTTGCG CGCTTTGCCT AACATAGTAT CAGTGCATAA TGTCTATGAT TTTCTATATC AGTTACAGTT CGATACCTCA GAAGATATGC GCCCCACTGT ATTTGATTTT GCCAAAGAAA ACGGATTGAA AATACTACAA ATTAATCACA AGCATAAAGA CTTAGAAGAA ACCTTCATTC AACTAACGGC TAATAATTAA
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Protein sequence | MSVEVQQLTK IYGQQVAVNA ISFQLEKGEI TGFLGPNGAG KSTTMKMITG ALTPTDGTIT VNGIDILKNP IEAQRTIGYL PEHNPLYTEM YVREYLRFMA ELYPKVPSDR IEEVIALTGL SSESDKKIEA LSKGYRQRVG LASALIHDPE ILILDEPTTG LDPNQLVEIR HIIKELGKRK TVLLSSHIMQ EIQALADRVI VLHKGNIVLD KKMTELQNKE QIIEVAFDFR VEERLLRALP NIVSVHNVYD FLYQLQFDTS EDMRPTVFDF AKENGLKILQ INHKHKDLEE TFIQLTANN
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