Gene Coch_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1210 
Symbol 
ID8367633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1416781 
End bp1417344 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content41% 
IMG OID644983634 
ProductLemA family protein 
Protein accessionYP_003141321 
Protein GI256820042 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTTA TAATAACCAT TGCAATCATA GTGATTCTAG TATTTTGGTA CATTAGTGCC 
AACAACAAAC TCGTGGCATT AGCCAATAAT CGTGAGAACG CCTTTGCTGA TATCGATGTG 
CAACTCAAGC AACGTCACGA CCTTATTCCT CAACTCGTAG CAGCTGTAAA AGGCTATATG 
ACTCACGAGT CCGATGTGCT CACCAAAATC ACTCAAGCGC GCAGTCGTGC TATGAGCGCT 
ACTGATATAA ACGATAAGAT TGCAGCTGAG AAAGAACTCT CTTCTGCTAT GGGTGCTTTC 
AATATCCAAG TAGAAGCTTA TCCTGATTTG AAAGCGAATA CTAACTTTAT GCACCTCCAA 
CAAGAAATTG CTGATATAGA AAATAAATTG GCGTCAGTGC GTCGCTTCTT CAACTCTACT 
ACCAAAGAGC TGAATACCGC TATCCAATCA ATACCTACTA ATATCGTAGC AGGTTTCAAG 
AAAATGACTC CACAACCCTT CTTCGATTTG GGTACAGAAC AACGCCAACA GTTGGATAAA 
GCTCCAGAGA TTTCGTTTAG CTAA
 
Protein sequence
MGLIITIAII VILVFWYISA NNKLVALANN RENAFADIDV QLKQRHDLIP QLVAAVKGYM 
THESDVLTKI TQARSRAMSA TDINDKIAAE KELSSAMGAF NIQVEAYPDL KANTNFMHLQ 
QEIADIENKL ASVRRFFNST TKELNTAIQS IPTNIVAGFK KMTPQPFFDL GTEQRQQLDK 
APEISFS