| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1195 |
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| Symbol | |
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| ID | 8367618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1402325 |
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| End bp | 1403707 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983619 |
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| Product | peptidase dimerisation domain protein |
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| Protein accession | YP_003141306 |
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| Protein GI | 256820027 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.944845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAG TAAAAAATTA TATCAATGAA AACAAAGACC GCTTTATTGC GGAACTGATA
GAACTGCTTA AAATGCCTTC TATTAGTGCC GATGCTGCCT ATTCTCAGGA TATGCTCAAC
ACTGCCGATG CCGTAAAAAA CGCCTTAGAG AAGGCTGGCT GCGACAAGGT AGAAATATGT
GAAACCCCTG GCTACCCTAT CGTCTATGGC GAAAAAACTA TCGACCCTGC CCTGCCTACT
GTTTTAGTAT ATGGGCACTA TGATGTACAA CCCGCCGACC CTATTGAGCT TTGGGAATCT
GACCCCTTTG AGCCTGTTAT CAAAAAAACC GATATTCACC CTGATGGAGC TATCTTCGCT
CGTGGGGCTT GCGACGACAA AGGGCAAATG TTTATGCACG TGAAAGCCCT TGAATATATG
GTGAAAAACA ACGTGCTCCC TTGCAATGTG AAGTTTATGA TTGAAGGCGA GGAAGAAATA
GGCTCAGGAA GCCTTAGTTG GTTTGTAAAA AACAACCACG AAAAACTCAA AAACGATATT
ATTCTCATTT CCGATACCAG TATGCTGGCT AACGACACCC CTTCTATCAC TACGGGCTTA
CGAGGACTTA GCTATGTGGA AGTGGAGGTT ACCGGTGCCA ACCGAGATTT GCACTCTGGT
TTATACGGTG GTGCCGTAGC AAACCCTATC AACGTGCTTA CTAAAATGAT TGCTTCTTTG
CACGACGAGA ACAACCGCAT TACCATTCCG CATTTTTACG ACAAAGTAGA AGAGCTCTCA
CAAGCTGAAC GCGATGAAAT GGCAAAAGCA CCTTTCTCAC TCGAAGCCTA CAAAAAAGCC
TTAGATATCG ATGAGGTATA TGGCGAAAAA GGCTATACTA CTACCGAGCG TGCCTCTATA
CGTCCTACCC TTGATGTAAA TGGTATCTGG GGAGGCTATA CAGGGCAAGG AGCTAAAACG
GTTATCCCAA GTAAGGCTTA TGCCAAAATA TCAATGCGCT TAGTGCCTAA CCAAGACAAC
CACGAAATTA CCGAGCTCTT CACCAAACAC TTTGAGAGTA TCGCACCAGC AGGTGTGCGC
GTGAAAGTAA CTCCGCACCA CGGCGGACAA GGCTATGTAA CTCCTACCGA TACGCCTGCT
TACCAAGCAG CAGTAAAAGC CTGCCAAGCG AGCTTCGGGA AAGAACCTAT ACCTGTGCGT
TCAGGTGGTA GTATTCCTAT TGTAGCTCTT TTTGAAGAAG AATTAGGTAG CAAATCTATT
CTCTTAGGCT TTGGTTTAGA TAGCGATGCT ATCCACTCGC CTAATGAACA CTACGGTATT
TTCAACTTCC TAAAAGGTAT TGAAACCATT CCGTGGTTCT ATCACTACTT CGTAAACAAG
TAA
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| Protein sequence | MDSVKNYINE NKDRFIAELI ELLKMPSISA DAAYSQDMLN TADAVKNALE KAGCDKVEIC
ETPGYPIVYG EKTIDPALPT VLVYGHYDVQ PADPIELWES DPFEPVIKKT DIHPDGAIFA
RGACDDKGQM FMHVKALEYM VKNNVLPCNV KFMIEGEEEI GSGSLSWFVK NNHEKLKNDI
ILISDTSMLA NDTPSITTGL RGLSYVEVEV TGANRDLHSG LYGGAVANPI NVLTKMIASL
HDENNRITIP HFYDKVEELS QAERDEMAKA PFSLEAYKKA LDIDEVYGEK GYTTTERASI
RPTLDVNGIW GGYTGQGAKT VIPSKAYAKI SMRLVPNQDN HEITELFTKH FESIAPAGVR
VKVTPHHGGQ GYVTPTDTPA YQAAVKACQA SFGKEPIPVR SGGSIPIVAL FEEELGSKSI
LLGFGLDSDA IHSPNEHYGI FNFLKGIETI PWFYHYFVNK
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