Gene Coch_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1174 
Symbol 
ID8367596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1384638 
End bp1385123 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID644983600 
Productribosomal protein L17 
Protein accessionYP_003141288 
Protein GI256820009 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACACG GAAATAAAAT TAATCATTTA GGAAGAAAAA CTGCTCACAG AAATTCAATG 
CTTGCTAATA TGGCGAGCTC ACTGATTGAG CATAAACGCA TTAACACTAC TTTGGCAAAA
GCAAAGGCTT TAAAACTATT TGTAGAGCCT TTGGTAACCA AATCTAAAGA AGATACCACT
CACAACCGTC GTATCGCTTT TAGTAAATTG CGCAATAAAT ATGCTGTTAC TGAGCTTTTC
AAAGAAGTGG CTGTAAAGGT AGGCGACCGC CCAGGAGGAT ACACTCGTAT CATTAAATTA
GGAAACCGTT TGGGTGATAA CGCTGAAATG GCTATGATTG AGTTTGTAGA TTACAATACT
ACTTACAACG TAGCTAAAAC CGCTAAGAAG AAAACTACCC GCCGTGGTAG AAAGAAAGCA
ACTGCTGAAG AAACTCCAGC TACAGCCGAA GTTAAACCAG AGGCTACTGC TGAAGCTACT
GAATAA
 
Protein sequence
MRHGNKINHL GRKTAHRNSM LANMASSLIE HKRINTTLAK AKALKLFVEP LVTKSKEDTT 
HNRRIAFSKL RNKYAVTELF KEVAVKVGDR PGGYTRIIKL GNRLGDNAEM AMIEFVDYNT
TYNVAKTAKK KTTRRGRKKA TAEETPATAE VKPEATAEAT E