Gene Coch_1154 details

Gene Information

• Locus tag: Coch_1154
• Symbol: rplP
• ID: 8367576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1375174
• End bp: 1375593
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644983580
• Product: 50S ribosomal protein L16
• Protein accession: YP_003141268
• Protein GI: 256819989
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000032781
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACAGC CAAAAAGAAC GAAATATCGT AAACAACAAA AAGGCAGAAT GAAAGGTGTA 
GCTCACCGCG GTGCGCTCCT TTCTAATGGT ACTTTCGGAA TTAAATCGTT AGATTCAGCA 
TTCATCACTT CTCGCCAAAT CGAGTCAGCT CGTGTAGCTG CTACCCGTTA TATGAAACGT 
GAAGGTCAAC TTTGGATCAA AATCTTCCCA GATAAACCTA TTACCAAAAA GCCTTTGGAA 
GTACGTATGG GTAAAGGTAA AGGTGCCGTA GAATACTGGG CAGCCGTAGT AAAACCAGGA 
AGAATAATGT TTGAGGTAGG CGGCGTGCCG CTCGACGTAG CTAAAGAAGC GCTACGCCTC 
GCAGCTCAAA AGCTACCTGT GAAAACAAAA TTCGTTGTAG CTAGAGATTA TCAAAATTAA 

 

Protein sequence

MLQPKRTKYR KQQKGRMKGV AHRGALLSNG TFGIKSLDSA FITSRQIESA RVAATRYMKR 
EGQLWIKIFP DKPITKKPLE VRMGKGKGAV EYWAAVVKPG RIMFEVGGVP LDVAKEALRL 
AAQKLPVKTK FVVARDYQN