| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1150 |
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| Symbol | rplB |
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| ID | 8367572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1372868 |
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| End bp | 1373695 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983576 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_003141264 |
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| Protein GI | 256819985 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000298819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGTTA GAAAATTAAA ACCGATTACC CCTGGTCAGC GTTTTAGAGT AGTAAACGAA
TTCGACACCA TTACTACTGA TAAGCCGGAA AAGAGCTTGC TCGTTCCGTT GAAAAAGACC
GGTGGTAGAA ACAATCAAGG AAAAATGACC ATGCGTTACA TTGGTGGTGG TCATAAGAAA
AAGTACCGTA TCATCGACTT CAAACGAAAC AAATTCGGCG TAGACGCCAA AGTAGTTTCT
ATCGAGTACG ACCCAAACAG AACAGCGTTT ATTGCTCTCG TTCAATATAC CGACGGTGAA
AAGCGTTACA TCATCGCTCC CGCTGGTTTG AAAGTAGATC AAGTAATCGT TTCAGGTCAA
GAAAACATCG CCCCTGAAAT CGGTAACGCA ATGCCGCTCT CTCAAATCCC TCTCGGTACT
GTAATTTCTT GTATTGAATT GCGCCCTGGA CAAGGAGCTA ACATCGCTCG TTCTGCAGGA
ACTTTTGCTC AACTAATGGC AAAAGATGGT AAGTATGCTA CTGTAAAGCT ACCTTCAGGT
GAAACTCGTA TGATCCTCCT CACTTGCCTC GCAACCATAG GAGCCGTATC AAACTCTGAT
CACCAATTGG TACTTTCAGG TAAAGCAGGT CGCTCACGCT GGTTAGGACG CCGTCCTCGT
ACCCGTGCAG TAGTTATGAA CCCTGTCGAT CACCCAATGG GTGGTGGTGA AGGTCGTGCT
ACCGGTGGTC ACCCACGCTC ACGTAAAGGT ATCCCAGCGA AAGGTTATAG AACTCGTTCT
AAAACCAAAG CAAGTAATAA GTATATTGTA GAACGCAGAA AAAAATAA
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| Protein sequence | MSVRKLKPIT PGQRFRVVNE FDTITTDKPE KSLLVPLKKT GGRNNQGKMT MRYIGGGHKK
KYRIIDFKRN KFGVDAKVVS IEYDPNRTAF IALVQYTDGE KRYIIAPAGL KVDQVIVSGQ
ENIAPEIGNA MPLSQIPLGT VISCIELRPG QGANIARSAG TFAQLMAKDG KYATVKLPSG
ETRMILLTCL ATIGAVSNSD HQLVLSGKAG RSRWLGRRPR TRAVVMNPVD HPMGGGEGRA
TGGHPRSRKG IPAKGYRTRS KTKASNKYIV ERRKK
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