Gene Coch_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1144 
Symbol 
ID8367566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1368201 
End bp1368677 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content43% 
IMG OID644983570 
Product30S ribosomal protein S7 
Protein accessionYP_003141258 
Protein GI256819979 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.269161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA GACAGGCTAA AAAACGCCCC CTTTTACCAG ACCCTAAGTT TAACGACCAA 
TTGGTTACGC GTTTCGTGAA TAACCTTATG TGGGACGGTA AAAAGTCAGT GGCTTTTAAA
GTATTCTACG ACGCAATTGA TATCGTAGAA CAAAAGAAGA ATAACGACGA AAAGTCGGCA
TTAGATGTTT GGAAAGACGC TCTTAGCAAT GTGATGCCTC ACGTTGAGGT GCGTTCACGT
CGCGTGGGTG GTGCTACCTT CCAAATTCCT ATGCAAATCC GCCCAGACCG TAAAGTGTCT
ATGGCGATGA AATGGCTCAT CGGTTTCGCT CGTAAACGCA ATGAGAAATC AATGGCTCAG
AAATTGGCTG CCGAAATTAT CGCTGCCTCT AAAGAAGAAG GTGCTGCTGT GAAGAAAAAA
ATGGATACGC ACCGTATGGC TGAAGCTAAC AAAGCATTCT CACACTTTAG ATTTTAA
 
Protein sequence
MRKRQAKKRP LLPDPKFNDQ LVTRFVNNLM WDGKKSVAFK VFYDAIDIVE QKKNNDEKSA 
LDVWKDALSN VMPHVEVRSR RVGGATFQIP MQIRPDRKVS MAMKWLIGFA RKRNEKSMAQ
KLAAEIIAAS KEEGAAVKKK MDTHRMAEAN KAFSHFRF