Gene Coch_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1143 
Symbol 
ID8367565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1367761 
End bp1368168 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content47% 
IMG OID644983569 
Productribosomal protein S12 
Protein accessionYP_003141257 
Protein GI256819978 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.584147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAA TTTCACAATT AGTACGAAAA GGAAGGACCA GAATTACCAA GAAGAGTAAA 
TCGGTTGCTT TGGATTCGTG CCCACAACGC CGAGGTGTAT GTACACGTGT GTACACCACA
ACGCCTAAAA AGCCGAACTC AGCTATGCGT AAAGTAGCTC GTGTTCGCTT GACTAATGGC
AATGAGGTGA ACGCTTACAT ACCTGGTGAA GGTCACAACC TCCAAGAACA CTCGATAGTA
TTGGTACGAG GCGGAAGGGT AAAAGATTTA CCAGGTGTTA GATACCACAT TGTTCGTGGT
GCTCTCGATA CGGCTGGTGT AGCAGGTAGA ACGCAACGCC GTTCTAAATA CGGTGCAAAA
CGCCCTAAAC CAGGACAAGC AGCTCCCGCC GACAAAAAGA AAAAGTAA
 
Protein sequence
MPTISQLVRK GRTRITKKSK SVALDSCPQR RGVCTRVYTT TPKKPNSAMR KVARVRLTNG 
NEVNAYIPGE GHNLQEHSIV LVRGGRVKDL PGVRYHIVRG ALDTAGVAGR TQRRSKYGAK
RPKPGQAAPA DKKKK