| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1142 |
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| Symbol | pheT |
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| ID | 8367564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1364888 |
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| End bp | 1367320 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983568 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_003141256 |
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| Protein GI | 256819977 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT CATATAACTG GTTAAAACAA TATTTGAAGT TAGAAATGCC TGCTGAAGAT
ACAGCGGTCA TCCTTACTGA TTTAGGCTTA GAAGTAGAAG GGATTGAACA CTTCGAAAGC
GTAAAAGGTG GGCTCAAAGG GGTAGTGGTA GGTCACGTAC TCGAATGCGA AAAACACCCT
AACGCCGATA AACTTAAAAT CACCAAAGTA GATGTAGGGG GCGAAGCTCC TTTGCAAATC
GTTTGTGGAG CTCCTAATGT AGCACAAGGG CAGAAAGTGC TTGTAGCCAC TATTGGCACA
GTACTCTACG ACAAAGCAGG TAAGCCTTTC GAAATTAAGA AAGGTAAAAT TCGTGGCGAA
GAGAGTTACG GTATGATTTG TGCTGAAGAC GAACTCGGCT TAGGCGAAAG TCACGATGGC
ATTATGGTGC TCGACAGTAA ATGGGAAGTA GGTACCCCTG CCAGTAAGGT GTTTGAGGTA
GAAACCGACG AGGTATTCGA AATAGGACTG ACTCCTAACC GCGCCGATGC AATGAGCCAC
TACGGTGTAG CACGCGACTT ACGTGCAGGC TTGATGCAAA AAGGTATTTC ATTAGAGCTC
ATCACTCCTT CTATTACAAA ATTCCACGTC GATAACCGTT CACTTAAAAT GGATATAGAG
GTACAGAACA AAAAACTCGT ACCTCGCTAT ACCGGTGTTA CCATTAGTAA TGTACGCGTA
GACGAATCGC CTGAATGGTT ACAAAACAAA CTCAAAGCCA TAGGCATTAC TCCTAAGAAC
AACGTAGTAG ATGCTACAAA CTACGTACTG CACGGAATGG GACAACCGAT TCACGCTTTT
GATGCCGACC ATATTATTGG TCGCAAGGTG ATTGTAAAGA ATGCCGATGA AGGCACAAAG
TTTAAAACCC TCGACGGAGT AGAACGCACC CTCAACGCTG AAGACATTAT GATTTGTGAT
GCCGAAAAAC CTCTCTGTAT AGCAGGGGTA TTAGGCGGTG AAAACTCAGG TATCACTCAT
TTTACTCGCA ATGTATTTTT AGAAAGTGCT TATTTCGATG CTGTATCGGT GCGCAAAACA
GCCAAACGTC ACGGCATCAA TACCGATGCT TCTTATCGCT TTGAGCGCGG TATTAATATA
GAAGATTGTA AATACGCCCT AATGTATGCC GCAGTACTGA TTGAAAATAT TGCAGGAGGG
GTTATATCAT CAGATGTGAT AGATTTTTAT CCTAAAAAGC AAGAAGATTT TCAGGTGTTT
CTTACTTTTG AGAAAATAGA TAAACTTATT GGTCAGAAGA TTTCACGCGA TACGATTAAG
GCTATCTTAC ACTCTTTAGA TATCAAAGTA AATTCGTTTA CCGAACGTGG GTTAGGTTTG
TCAGTCCCTT CGTACCGCGT AGATGTACAG CGTGAAGCCG ATGTAATAGA GGAAATCCTT
CGTATCTATG GCTACAACAA TGTCATTTTC TCTGAAAAGC TAAATGCTAC AATGGCGCAT
TCTAACAAAT ACGACGACCA CAATATACAA AATGTGGTAG CCGACCAGTT GGTAGCGAAA
GGCTTCTTTG AGATAATGAC CAACAGTCTT GTGTCAGAAA AAGAGATTAC TACTTATGCC
GAAAATCCAG AGCAAGCAGT AAAACTCCTC AATCCTTTGA GTAGCGATTT GGGCTATATG
CGTAAAAATC TAGTGTTTTC AGGCTTAGAA GTGATTGCTT ATAATAACAA CCGCAAACGC
TCCGATTTGA AATTGTTCGA GTTTGGCAAG AACTATCACT ATATCGATGG CAATTATACT
GAAAACAAGC ATTTGGTGTT ATATCTCACA GGTAATACCC AACCTGAGTA TTGGGGCGCT
CCCGCTCAAA AAACCTCTTT CTTTGAGCTC AAAGGAGTAG TGGAATCTCT CTTCGAACGT
CTCGGCTTGA AGGAAATCAC TATTTTACCT TTAGAAGCTA ACGACACGTT GAGTAGTGAA
GGATTCCGTT GGCAAATAGG GGAGACCCTT TTAGGAACGA TAGGAGTAGT AAAAAGCAAA
GTGCTTAAAG ATTTCGATAT CAAACAAGAG GTGCTTGTAG CTGATTTGCA TTGGGAAGTA
ATTTTAGAAC AAGTACAAGA CCATAAAGTG GTATATAAGG AAATCTCTAA ATACCCCGAA
GTACGTCGTG ACTTAGCTCT TTTGCTCGAT GAGAAAGTAA CCTTTGCCGA CCTTTACGAA
AAGGCATATG CTACCGAGAA AAACCTCTTA AAACACGTAA ATCTTTTTGA TGTGTACCAA
GGCGACAAAC TACCCGAAGG CAAGAAGAGC TATGCCCTCA GTTTTGTACT TCAAGACAAC
AATAAAACTC TTACCGATAA ACAAATCGAC AAAACGATGC AACACCTCCA AGATGCTTTT
GAAAAGCAAT TTGGCGCAGC ATTAAGAGAG TAA
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| Protein sequence | MKISYNWLKQ YLKLEMPAED TAVILTDLGL EVEGIEHFES VKGGLKGVVV GHVLECEKHP
NADKLKITKV DVGGEAPLQI VCGAPNVAQG QKVLVATIGT VLYDKAGKPF EIKKGKIRGE
ESYGMICAED ELGLGESHDG IMVLDSKWEV GTPASKVFEV ETDEVFEIGL TPNRADAMSH
YGVARDLRAG LMQKGISLEL ITPSITKFHV DNRSLKMDIE VQNKKLVPRY TGVTISNVRV
DESPEWLQNK LKAIGITPKN NVVDATNYVL HGMGQPIHAF DADHIIGRKV IVKNADEGTK
FKTLDGVERT LNAEDIMICD AEKPLCIAGV LGGENSGITH FTRNVFLESA YFDAVSVRKT
AKRHGINTDA SYRFERGINI EDCKYALMYA AVLIENIAGG VISSDVIDFY PKKQEDFQVF
LTFEKIDKLI GQKISRDTIK AILHSLDIKV NSFTERGLGL SVPSYRVDVQ READVIEEIL
RIYGYNNVIF SEKLNATMAH SNKYDDHNIQ NVVADQLVAK GFFEIMTNSL VSEKEITTYA
ENPEQAVKLL NPLSSDLGYM RKNLVFSGLE VIAYNNNRKR SDLKLFEFGK NYHYIDGNYT
ENKHLVLYLT GNTQPEYWGA PAQKTSFFEL KGVVESLFER LGLKEITILP LEANDTLSSE
GFRWQIGETL LGTIGVVKSK VLKDFDIKQE VLVADLHWEV ILEQVQDHKV VYKEISKYPE
VRRDLALLLD EKVTFADLYE KAYATEKNLL KHVNLFDVYQ GDKLPEGKKS YALSFVLQDN
NKTLTDKQID KTMQHLQDAF EKQFGAALRE
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