| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1132 |
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| Symbol | |
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| ID | 8367554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1348006 |
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| End bp | 1350264 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644983559 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003141247 |
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| Protein GI | 256819968 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.730093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTG CCATAGTAGG GTGTAATCGT TCCTCTAGTG AGGACGCTAG CACCCCCGTG
AAATGGGAGT CATTCAGTGG CGATAAAAAT ATCGAGCGCA AAGTAGATTC TTTGCTAGCG
CTGATGACCT TAGAAGAAAA AATCGGACAA CTCTCGCAGT TCTCTGCCAA TTGGGACATC
ACAGGGCCCG TAATGCCGGG TGACTTTCAG CCGTATCTCG AAAAAGGTCT TGTGGGCAGT
GTGTTCAACG CTGTTACCGT GCCTGGGGTG CGCAAAATGC AGGATATTGC TGTGAAGAAA
ACTCGCTTGG GTATCCCTAT CCTCTTTGGT TACGACGTGA TTCACGGTTA TAAAACCATC
TTCCCTATGT CGCTTGCCGA AGCCTGCTCT TGGGATTTGG AACTAATGCG CCAAACCGCT
GCTATTGCTG CCGAAGAAGC TGCCGCCGAT GGTATCAAAT GGACGTTCGC CCCTATGGTG
GATATCAGCC GAGACCCGCG CTGGGGGCGT GTGATGGAAG GCGCTGGCGA AGACCCTTTC
TTGGGTAGTG AAATCGCCAA AGCTCGCGTA CAAGGTTTTC AAGGCGGTAC CGACTGGCGT
TCGCTTAATA AAACCAATAC TATTTTGGCG TGCGTGAAAC ACTTTGCTGC CTATGGTGCT
GCCGAGTCAG GTCGCGACTA CAACACTGCT GAGCTCTCTC AGCACACCTT GTGGAATGTC
TATCTCCCTC CTTATAAAGC AGCGATTGAT GCAGGAGTGG GTACAGTAAT GGCTTCCTTC
AACGAGGTGA ATGGTATTCC AGCAACTGCC AACCGCTACC TAATGACGGA TATCCTCCGC
AAGCAATGGG GCTTCAAAGG CTTTGTAGTA ACCGATTATA CTGGTATCAA CGAACTCATT
CCTCACGGTA TTGCTGCCGA CAATAAGCAG GCTGCTGAAC TAGCAATCAA TGCAGGTATT
GATATGGATA TGACAGGTTC TAATTTTATC AAGCATCTCA AAAAATCAGT AGAAGAGGGC
AAGGTAAAAG AAGAAGCTAT CAACACCGCC GTACGCCGTA TCTTGGAAAT GAAATTCGTA
TTGGGCTTGT TTGATGATCC TTACAAGTTC CTTGATGAGA ACCGCGCCAA AGCAACCCTT
ATGAAACCGG AGTTCTTGCA AGTAGCACGT ACTGCTGTTA CTAAATCGGT GGTATTGCTC
AAGAACAACG CCGAGGTATT GCCTATCACT CCGGATATGG TGAAAAAGGT AGCTCTCATA
GGTCCTATGG TAAAAGATTC TATCAACCAG AATGGCGAAT GGCAAGGTCG TGGCGACCGT
GAGCTCAGCG CTTCTCTTTT CAAAGGATTA CAAGAAGTGT ATAAAGATAG TAAGGTGCAG
TTCAGTTATG CCAAAGGTTG TACCCTTACT GCCACTACTT CTGCCGATAT TGCCAAAGCA
GTAGCCACTG CACGCGCTGC CGATGTAGCA GTGGTAGCCT TAGGTGAAGA CTATAACTGG
TCAGGTGAAT CTGCTTGTCT CACCGATATA CGTTTGCGCG CTCCTCAACG CGAATTGCTC
CGTGCGCTCA AACAAACAGG CAAACCTATA GTGTTATTGG TGTATAGTGG TCGTCCGCTC
GATCTCAGTG AAGAGAGTGA ATTAGCCGAT GCTATTTTGC AAGTGTGGTT CCCTGGTACT
CAGTCAGGTT ATGGTATCGC CGATGTATTA GCTGGTAAGT ACAACCCTTC AGGGCGTTTG
GTGATGAGTT TCCCTCGTAA TGTTGGACAA GTGCCTATCT ATTACAATCA CAAGAACACC
GGTCGTCCCG TAGATCCTAA TAACCCAATG GGTGATTATC GTTCTAAATA CGAAGATGCA
CCTATCACAC CGCTCTATCC TTTTGGTTAC GGATTGAGTT ATACTACCTT TAATATTAGT
AATGTACAGC TCAGCAGCGC CACCCTCAGC AAAGGAGGTA AACTCACCGT TACAGCACAA
GTAGCCAATA CCGGCAAACG TGATGGTGAA ATAGTAGTGC AATTGTATAT TCGCGATTTG
GTGGGTACCG TAACCCGTCC AGTCAAAGAA CTCAAAGGAT TCCAAAAAGT GGCTCTCAAG
ACAGGTGAAA GCAAGCAAGT ACAGTTTGAA ATTACCGAAG ACCTCTTAGC CTTCTACAAC
GCCGATTTGA AAAAAGTAAC CGAACCTGGC GCTTTCAAAC TTTGGGTAGC TCAACACTCT
GCCGATAACA GCAACGAAAA AGATTTTGAA CTAAAGTAG
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| Protein sequence | MAIAIVGCNR SSSEDASTPV KWESFSGDKN IERKVDSLLA LMTLEEKIGQ LSQFSANWDI
TGPVMPGDFQ PYLEKGLVGS VFNAVTVPGV RKMQDIAVKK TRLGIPILFG YDVIHGYKTI
FPMSLAEACS WDLELMRQTA AIAAEEAAAD GIKWTFAPMV DISRDPRWGR VMEGAGEDPF
LGSEIAKARV QGFQGGTDWR SLNKTNTILA CVKHFAAYGA AESGRDYNTA ELSQHTLWNV
YLPPYKAAID AGVGTVMASF NEVNGIPATA NRYLMTDILR KQWGFKGFVV TDYTGINELI
PHGIAADNKQ AAELAINAGI DMDMTGSNFI KHLKKSVEEG KVKEEAINTA VRRILEMKFV
LGLFDDPYKF LDENRAKATL MKPEFLQVAR TAVTKSVVLL KNNAEVLPIT PDMVKKVALI
GPMVKDSINQ NGEWQGRGDR ELSASLFKGL QEVYKDSKVQ FSYAKGCTLT ATTSADIAKA
VATARAADVA VVALGEDYNW SGESACLTDI RLRAPQRELL RALKQTGKPI VLLVYSGRPL
DLSEESELAD AILQVWFPGT QSGYGIADVL AGKYNPSGRL VMSFPRNVGQ VPIYYNHKNT
GRPVDPNNPM GDYRSKYEDA PITPLYPFGY GLSYTTFNIS NVQLSSATLS KGGKLTVTAQ
VANTGKRDGE IVVQLYIRDL VGTVTRPVKE LKGFQKVALK TGESKQVQFE ITEDLLAFYN
ADLKKVTEPG AFKLWVAQHS ADNSNEKDFE LK
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