Gene Coch_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1131 
Symbol 
ID8367553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1346325 
End bp1347968 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content41% 
IMG OID644983558 
ProductGlucan endo-1,3-beta-D-glucosidase 
Protein accessionYP_003141246 
Protein GI256819967 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.232091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC TTAAACTGTT AGGATTGTTA CTATTAACAA TCTTTGCATC TTGTAAAGAC 
AAGAATCCAT TAGCCGAATT AATCGCCCCA AACAACGTAA AAGCCACTTA TAAAATTATA
GGAGCAGATG CCCAACATCC TAACGGAGAT GGCTCTGGCT TGGTAGACTT TACTGTTACT
GCCAATAATG CAATCACCTT TCGCATTGAT TTTGGTGATG GAAAAAGTGA GGTAACGCCC
TCTGGTATGA TTCAGCACCG CTATACCAAA GTAGGAACCA ACAAGTTCAC TGCTGTAGTG
AGTGCTGTAG GGATTGGAGG AAATATGACT TCTACATCCT TAGAAATTGA AGTATATAGC
TCCTTCTCCG ATGCAGAAGC CGAAAATCTA TTGGCTGGTA AGAACATAGG AGATAGTAAG
ACGTGGTATT GGGCTGCTAA TGTAAAAGGG TATGCAGGCT TAGGTCCTCA AGAGAGTGGC
GACAATAGTG AATATGGCTA CCCTGCGTGG TGGCAAGCCG AACCTTTCGA CGCTACTCGT
ACTTGTATGT TTGAGAACTC TTTCATCTTC ACTCGTACCA CTAATGGTGT TACCTATAAA
CAAACTGCCG ACCACGTGTT TGTACCAGGA GCCTATGCAA GTGTGTTGGG TGTTGCTAAA
GACCAATGTT ACGGTACCGA TGTGATACCT ACTATTACAG GGGAAAAACA AGTATCGTTT
GTTCCTTCTA CTTCCAAAGC CGCTACTCAA GGTAAGTACG ATAACAAAGC ATACCGTGGT
ACAGCTATTG AGCTCTCCAA TGGAGGTATG CTCGGTTGGT GGGTAGGAGC GAGCACTTAT
GATATCATCA GCCTTAGCGA TACCCAACTC ATCGTACGCG TAATGCAACC TAACAGTCAG
TTTGCTTGGT ATCACATTTT CACCACTACC AAACCTTCCG AAAATAGTTT TACAAACCTT
GTATGGTTTG ACGAGTTCAA CAAAGCGGGT GCTCCCGATG CTACTAAATG GACGTATGAT
TTAGGCAAAG GTAATAACGG TTGGGGCAAT GGTGAACTCC AAAATTACAC CAAAGAAGCT
GAGAATGTAA AAGTAGAAAA TGGTGTGCTT AAAATCACTG CTAAAGCTGA TGGTAAAGGA
GGTTACACTT CTGCCCGCAT AAAAACCGAA GGGTTATATG GTTTCAAATA CGGCAAATTG
GAAATCAAAG CCAAACTCCC TGCTACACAA GGAACTTGGC CAGCAATGTG GCTATTGGGT
AATAACTTCG CTACAGAAGG CTGGCCTAAA TGTGGCGAAA TAGATCTCTT AGAACAAAAA
GGTAATAAGA AAACCCATAT ACTTGGGGCT TGTCACTGGT ATGACACCGA TAACCATCAC
CAAGGAGATT ACGATAAAGA AATAGCTTTT GCCAATGCTT CCACAGATTT TCATATCTAT
ACAATGACGT GGACAGAAAA AAAGATTATC TTTGCAGTCG ATAATCAAAA CTATTTCGAG
ATGAATAACA ATGGCAAATT GCCTTTTAAC CAAAAATTCT TTCTCATTTT CAACATAGCG
ATGGGAGGTA CTTTGGGGGG TAATGTTGCT GCTAATTTCA CTCAGGATAG CCTTGAAATC
GATTACGTAA GAATTTATCA ATAA
 
Protein sequence
MKTLKLLGLL LLTIFASCKD KNPLAELIAP NNVKATYKII GADAQHPNGD GSGLVDFTVT 
ANNAITFRID FGDGKSEVTP SGMIQHRYTK VGTNKFTAVV SAVGIGGNMT STSLEIEVYS
SFSDAEAENL LAGKNIGDSK TWYWAANVKG YAGLGPQESG DNSEYGYPAW WQAEPFDATR
TCMFENSFIF TRTTNGVTYK QTADHVFVPG AYASVLGVAK DQCYGTDVIP TITGEKQVSF
VPSTSKAATQ GKYDNKAYRG TAIELSNGGM LGWWVGASTY DIISLSDTQL IVRVMQPNSQ
FAWYHIFTTT KPSENSFTNL VWFDEFNKAG APDATKWTYD LGKGNNGWGN GELQNYTKEA
ENVKVENGVL KITAKADGKG GYTSARIKTE GLYGFKYGKL EIKAKLPATQ GTWPAMWLLG
NNFATEGWPK CGEIDLLEQK GNKKTHILGA CHWYDTDNHH QGDYDKEIAF ANASTDFHIY
TMTWTEKKII FAVDNQNYFE MNNNGKLPFN QKFFLIFNIA MGGTLGGNVA ANFTQDSLEI
DYVRIYQ