Gene Coch_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1117 
Symbol 
ID8367539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1321333 
End bp1322052 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content36% 
IMG OID644983545 
Producthypothetical protein 
Protein accessionYP_003141233 
Protein GI256819954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.686575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT TTTTAATCAT CATTTTTTTG AGTGTTACTA CATTTAGCTT TGCACAAACC 
GCAATAGGGG TGAAAGTAAC CGACCCTCTA TCAGCTGTTA GCCTAATAAC TCCTTTATAT 
ACAGCTACCA ATGTTGATAT AAAAACCTAC AATGCCTTTG TTAGCCTTGG AGGCTTCGTT 
CGTATTCCTT TAAAAGAGCG TTGGGTATTA CAAAGTGAAT TGCTTTTTAA GCACGAAGCT 
GTGCGTTTTA GAATAGAGAA TAGCAGCAAA GATTCTTATT ATAGATTTGA ATACTTGGAC 
GTGCCTTTCT TAGTACAATA CGAAGGTAAG AAAGCGTTTA GAGGTTTTGG TTTTGTAGGT 
TTTTCACCTA AAATTCTCTT CTCTTCTTCT TTTTATGATG CCTCTAAGAA TATTACTTAT 
GGAGGGAGTT CCCAATTTAA TACAGTGATG TTGATGGGAC ATATTGGAGG AGGTGTGCTA 
TTTGAGCGCC CTAAATGGAT TTATACAGTT GATGCTCGTC TTTCTACCAA TATAACGAAC 
TTAGCATCAG GAATCCGTAC AGAATATATC AATTTTGATA AAGCGAGAAC ATTTGTGTTT 
GGCATTTCGT TAGGCGCAGG CTACAAACTC TCTAAAAAGA TGAGAACTAT TCCTCAAGAA 
GAGCTCCCAA TTATTATTAA TGATAGCATT CCTGCTGAGG TGAATATACC ACAAAAATAA
 
Protein sequence
MKRFLIIIFL SVTTFSFAQT AIGVKVTDPL SAVSLITPLY TATNVDIKTY NAFVSLGGFV 
RIPLKERWVL QSELLFKHEA VRFRIENSSK DSYYRFEYLD VPFLVQYEGK KAFRGFGFVG 
FSPKILFSSS FYDASKNITY GGSSQFNTVM LMGHIGGGVL FERPKWIYTV DARLSTNITN 
LASGIRTEYI NFDKARTFVF GISLGAGYKL SKKMRTIPQE ELPIIINDSI PAEVNIPQK