Gene Coch_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1103 
Symbol 
ID8367525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1304433 
End bp1305227 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content41% 
IMG OID644983531 
Productcytochrome c assembly protein 
Protein accessionYP_003141219 
Protein GI256819940 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCATT ATTTTAATCT TATAACATAT ATTACAGTAG CTTTGTGGCT ACTTTCGGGT 
ACGCTTATCT ACAGCAAGAG CAAAGCGCTT AGAGGAGTGA GTATTGTAGC TCACTTAGTA
GCTACCTTAA CCATAGGAGG TTTTATTGTT GCCTTATGGC AAAACTTAGA CCGTCCGCCA
TTGCGCACAC TTGCCGAAAC GCGTATTTGG TATGCTTTTT TTATGGGGCT TATAGGCTGT
GCTATCTATT GGCTCTATCG TCAAAAGTGG ATGCTTAGCT ATTCAGCAGT AATGGGTATT
GTATTTGTAG TGCTTACCTA CACTCACCCC GATACAATGA ACAAAGCCCT GATGCCTGCC
TTACAGAGCG TGTGGTTCAT TCCACACGTA ATCGTGTATA TCTTTGCTTA TGCGATGTTG
GGTATGGCTT CACTTACTGC TTTCTATGGC ATTTATCGCT ATAAAAAAGG AAAAGAGGTA
CAATCAATCT TTACTGTTAT CGACCAACTC GTAAAAATAG GTTATGTATT TCTCACCTTT
GGATTGCTTT TTGGAGCCCT TTGGGCAAAA GAAGCGTGGG GACACTATTG GACGTGGGAC
CCTAAAGAAA CTTGGGCGTT TATCACTTGG CTCGGCTATT TGGTATATCT CCACCACAAG
TACAATCACA AAGAAAAGAA ACCCTTTCAG AGTTTTATCA TTGTAGGACT TGCATTTATA
CTATTGCTCA TCTGCTGGTT TGGCGTTAAT TACTTGCCAA CGGCACAAAT GAGTGTACAT
ACCTATTCAG GATAA
 
Protein sequence
MWHYFNLITY ITVALWLLSG TLIYSKSKAL RGVSIVAHLV ATLTIGGFIV ALWQNLDRPP 
LRTLAETRIW YAFFMGLIGC AIYWLYRQKW MLSYSAVMGI VFVVLTYTHP DTMNKALMPA
LQSVWFIPHV IVYIFAYAML GMASLTAFYG IYRYKKGKEV QSIFTVIDQL VKIGYVFLTF
GLLFGALWAK EAWGHYWTWD PKETWAFITW LGYLVYLHHK YNHKEKKPFQ SFIIVGLAFI
LLLICWFGVN YLPTAQMSVH TYSG